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          • › Hs04845235_cn
          See other UBE2D3 CNV Assays ›
          Gene Symbol
          UBE2D3
          Assay Reference Genome
          Location

          Chr.4:102835572 on build GRCh38
          Cytoband
          Assay ID Hs04845235_cn
          Size
          Availability Made To Order
          Catalog # 4400291
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Target Gene Details

          Entrez Gene ID:

          7323

          Gene Name:

          ubiquitin conjugating enzyme E2 D3

          Gene Aliases:

          E2(17)KB3, UBC4/5, UBCH5C

          Location:

          Chr.4:102794383-102868895 on Build GRCh38

          Assay Gene Location:

          Within Intron 1
          Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
          UBE2D3 NM_181890.3 NP_871619.1
          NM_181893.3 NP_871622.1
          BG613555.1
          BU570661.1
          DA965437.1
          HY109217.1

          Target Gene Details

          Entrez Gene ID:

          105377348

          Gene Name:

          UBE2D3 antisense RNA 1

          Gene Aliases:

          -

          Location:

          Chr.4:102828055-102844106 on Build GRCh38

          Assay Gene Location:

          Within Intron 2
          Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
          UBE2D3-AS1 NR_131185.1
          NR_131186.1
          AK093356.1
          CD368268.1
          HY045516.1

          Target Copy Number Variation Details

          DGV Version:

          Release date: 2025-12-01, GRCh GRCh38
          Target
          Variation
          Location CNV
          Subtype
          Genes
          nsv5547030 Chr.4:68996170 - 113894177 on Build GRCh38 Insertion SEC24B-AS1 SLC39A8 AMTN PDLIM5 LINC02267 TACR3 CXCL13 PPP3CA-DT CSN1S1 ANK2 MIR1255A NEUROG2-AS1 CASP6 BANK1 ARHGEF38-IT1 PF4V1 MIR4450 SMR3A RUFY3 LEF1-AS1 MIR8066 NKX6-1 CXCL8 MUC7 MIR5705 NAP1L5 UGT2B11 SLC9B1 PPM1K-DT DSPP STATH MMRN1 ENAM CFAP299 LINC02483 RASSF6 MOB1B PRDM8-AS1 MIR302C HTN1 CCSER1 TET2 AFM DMP1 ANKRD17 EIF4E SCARB2 SEPTIN11 PTPN13 SEC31A CFI CXCL6 WDFY3-AS2 H2AZ1-DT NUP54 UBE2D3-AS1 NAA11 GAR1-DT CSN1S2BP ABRAXAS1 JCHAIN SPP1 LEF1 CSN3 THAP9-AS1 ATOH1 MIR302B LINC01094 TIFA NPFFR2 PF4 SOWAHB TACR3-AS1 CAMK2D RPL34 TMSB4XP8 TMEM150C LINC00575 PCAT4 SNCA SLC4A4 PARM1-AS1 HSD17B11 ALPK1 AFF1-AS1 RPL34-DT UNC5C NFKB1 LOC105377267 WDFY3-AS1 SNORA101A MRPS18C STPG2-AS1 PLAC8 MIR8082 MAPK10-AS1 CXCL3 BMP3 COPS4 UGT2A1 MTTP MIR576 UGT2B7 FAM13A GAR1 AREG FAM47E-STBD1 SNORD143 LOC102723704 FAM13A-AS1 AP1AR DDIT4L-AS1 ENOPH1 HNRNPD CXXC4-AS1 LOC105377352 CHCHD2P7 HELQ LOC105377329 CYP2U1 CXCL5 SMARCAD1-DT COL25A1 GIMD1 SHROOM3-AS1 MIR302A KLHL8 MIR4451 ELOVL6 LINC02499 GSTCD HADH NFKB1-AS1 LINC02503 GRID2 ETNPPL SCPPPQ1 PAPSS1 METAP1 CDKL2 IBSP SLC10A6 CXCL2 H2AZ1 SDAD1 ENPEP CCDC158 LINC00989 PCNAP1 USO1 LRIT3 CABS1 LARP7 ADH6 CSN2 BMP2K-DT LOC100421494 DAPP1 PARM1 TSPAN5-DT MIR367 SULT1B1 STBD1 ABCG2 SULT1E1 ADH7 MIR1243 LINC02945 MTHFD2L OSTC ANXA3 MIR575 LINC01217 PRKG2 PIGY EPGN LINC01218 AFF1 AP1AR-DT CNOT6L LAMTOR3 LOC102725220 MEPE NEUROG2 ARHGEF38 PANCR UGT2A2 MAPK10 GC PRKG2-AS1 TET2-AS1 LOC105377276 LINC02994 FAM241A LOC105377366 RAP1GDS1 AFP SHROOM3 PDHA2 HPGDS G3BP2 PKD2 EMCN LOC101929577 CSN1S2AP UGT2B28 TSPAN5 GPAT3 THAP6 CXCL9 ODAPH EREG SNCA-AS1 COX18 WDFY3 SPARCL1 SMR3B FRAS1 MIR302CHG ADH1C ODAM ZGRF1 CXCL1 COQ2 C4orf36 STPG2 SGMS2 LINC01088 HSP90AB3P LOC124900867 SDAD1-AS1 MIR548AH INKILN MCUB CISD2 LIN54 BMPR1B-DT UTP3 LINC01216 SLC9B2 SNORD161 DDIT4L PPM1K BTC BMPR1B ALB LOC124900866 NAAA PIGY-DT OPRPN MIR4452 RPS6P6 LOC124900752 GSTCD-AS1 CXCL11 FDCSP UMLILO HPSE ADH4 SCD5 GPRIN3 TIGD2 RCHY1 GRSF1 PPA2 LINC02173 MRPL1 UBE2D3 LNCPRESS2 HTN3 LOC124900868 FAM47E BMP2K CENPE LINC02428 ANTXR2 LOC101928893 PPBP HNRNPDL CCNG2 ADAMTS3 ADH1A UNC5C-AS1 LINC02562 EGF HERC5 PYURF DCK MIR297 PPBPP2 CDS1 ADH5 LOC101929621 DMP1-AS1 PRDM8 CXCL10 AMBN MIR302D LOC124900855 TBCK ART3 HERC3 SNORD144 LOC100507053 HSD17B13 FGF5 ARHGAP24 NUDT9 INTS12 NPNT MIR3684 PRR27 MANBA CYP2U1-AS1 THAP9 AIMP1 CXXC4 HERC6 PPP3CA TRMT10A SMARCAD1 ANKRD17-DT PITX2 GK2 ADH1B PPEF2 CCNI SEC24B RPS26P25 C4orf17 COL25A1-DT DNAJB14 PAQR3 DKK2 RRH PLA2G12A C4orf54 UGT2B4 RASGEF1B HNRNPD-DT BDH2
          nsv594957 Chr.4:102806853 - 102948934 on Build GRCh38 Loss SLC9B1 UBE2D3 CISD2 UBE2D3-AS1

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          More Information


          Additional Information:

          For this assay, SNP(s) [rs113219511,rs114517476] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

          Set Membership:

          Intragenic Intronic Non-exonic DGV Variation

          Gene Ontology Categories:

          Function(s) Process(es)

          negative regulation of transcription from RNA polymerase II promoter
          protein polyubiquitination
          DNA repair
          ubiquitin-dependent protein catabolic process
          protein monoubiquitination
          apoptotic process
          cellular response to DNA damage stimulus
          protein ubiquitination
          negative regulation of BMP signaling pathway
          protein modification process
          proteasome-mediated ubiquitin-dependent protein catabolic process
          protein autoubiquitination
          protein K48-linked ubiquitination
          protein K11-linked ubiquitination
          protein K6-linked ubiquitination
          positive regulation of protein targeting to mitochondrion
          nucleotide binding
          ubiquitin-protein transferase activity
          protein binding
          ATP binding
          transferase activity
          ubiquitin protein ligase activity
          ubiquitin conjugating enzyme activity

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