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See other TCF25 CNV Assays ›
Gene Symbol
TCF25
Assay Reference Genome
Location

Chr.16:89904377 on build GRCh38
Cytoband
16q24.3
Assay ID Hs05440933_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 22980

Gene Name:

 transcription factor 25

Gene Aliases:

 FKSG26, Hulp1, NULP1, PRO2620, hKIAA1049

Location:

 Chr.16:89873583-89911384 on Build GRCh38

Assay Gene Location:

 Within Intron 15
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TCF25 NM_014972.2 NP_055787.1
XM_005256297.2 XP_005256354.1
XM_005256298.2 XP_005256355.1
XM_005256299.2 XP_005256356.1
XM_011522956.2 XP_011521258.1
XM_011522957.2 XP_011521259.1
XM_011522958.2 XP_011521260.1
XM_011522959.2 XP_011521261.1
XM_011522960.2 XP_011521262.1
XM_011522961.2 XP_011521263.1
XM_017023047.1 XP_016878536.1
XM_017023048.1 XP_016878537.1
XM_017023049.1 XP_016878538.1
XM_017023050.1 XP_016878539.1
XM_017023051.1 XP_016878540.1
XM_017023052.1 XP_016878541.1
XM_017023053.1 XP_016878542.1
XM_017023054.1 XP_016878543.1
XM_017023055.1 XP_016878544.1
XM_017023056.1 XP_016878545.1
XM_017023057.1 XP_016878546.1
XM_017023058.1 XP_016878547.1
AB028972.1 BAA83001.1
AF130092.1 AAG35518.1
AF322111.1 AAG50276.1
AK095785.1 1 428
BC000959.1 AAH00959.1
BC009349.2 AAH09349.1
BC011884.2 AAH11884.1
DQ321703.1 ABC55265.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv457624 Chr.16:89738447 - 89915950 on Build GRCh38 Loss TCF25 LOC107984817 SPIRE2 LOC105371419 ZNF276 FANCA
esv2762221 Chr.16:89610380 - 90039318 on Build GRCh38 Gain+Loss VPS9D1-AS1 TCF25 LOC107984817 CDK10 GAS8 SPATA33 TUBB3 VPS9D1 GAS8-AS1 DPEP1 SPATA2L MC1R CHMP1A DEF8 SPIRE2 CENPBD1 DBNDD1 LOC105371419 ZNF276 FANCA AFG3L1P
nsv573810 Chr.16:89857498 - 90037251 on Build GRCh38 Loss TUBB3 GAS8-AS1 TCF25 MC1R DEF8 SPIRE2 CENPBD1 DBNDD1 GAS8 AFG3L1P
nsv428331 Chr.16:89216635 - 90185980 on Build GRCh38 Gain+Loss LOC107984817 LOC100287036 CDK10 SPATA33 SNORD68 VPS9D1 DPEP1 ANKRD11 MC1R DEF8 LOC105371419 ZNF276 FANCA VPS9D1-AS1 FAM157C LOC105371414 TCF25 RPL13 SPG7 TUBB8P7 GAS8 TUBB3 GAS8-AS1 PRDM7 SPATA2L CHMP1A SPIRE2 CENPBD1 LOC101927817 DBNDD1 ZNF778 AFG3L1P CPNE7 URAHP
nsv573799 Chr.16:89852186 - 90022379 on Build GRCh38 Gain TUBB3 TCF25 MC1R DEF8 SPIRE2 CENPBD1 DBNDD1 LOC105371419 GAS8 AFG3L1P
nsv511563 Chr.16:89904112 - 89909088 on Build GRCh38 Loss TCF25
nsv509640 Chr.16:89899749 - 89969797 on Build GRCh38 Insertion TUBB3 TCF25 MC1R DEF8 CENPBD1
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss CDK10 IL17C LOC100289580 SPATA33 ACSF3 SNORD68 SNAI3-AS1 LOC339059 VPS9D1 DPEP1 LOC101927793 MC1R MVD SLC22A31 FANCA SNAI3 TCF25 CTU2 LINC00304 MIR4722 GALNS CHMP1A SPIRE2 LOC100129697 AFG3L1P URAHP CDT1 TRAPPC2L LOC107984817 CBFA2T3 LOC100287036 CDH15 ANKRD11 PIEZO1 DEF8 LOC107987238 LOC105371419 ZNF276 CYBA LOC105371409 VPS9D1-AS1 FAM157C LOC105371414 PABPN1L RPL13 SPG7 LOC400558 TUBB8P7 GAS8 TUBB3 GAS8-AS1 PRDM7 SPATA2L CENPBD1 LOC101927817 DBNDD1 RNF166 ZNF778 CPNE7 APRT
nsv1066499 Chr.16:89891957 - 90028891 on Build GRCh38 Loss TUBB3 TCF25 MC1R DEF8 CENPBD1 DBNDD1 GAS8 AFG3L1P

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