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          • Home
          • › Search Tool
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          • › Hs05579957_cn
          See other LARGE-AS1 CNV Assays ›
          Gene Symbol
          LARGE-AS1
          Assay Reference Genome
          Location

          Chr.22:33733471 on build GRCh38
          Cytoband
          Assay ID Hs05579957_cn
          Size
          Availability Made To Order
          Catalog # 4400291
          Price
          Your Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Target Gene Details

          Entrez Gene ID:

          100506195

          Gene Name:

          LARGE antisense RNA 1

          Gene Aliases:

          -

          Location:

          Chr.22:33724986-33750817 on Build GRCh38

          Assay Gene Location:

          Within Exon 5
          Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
          LARGE-AS1 NR_038949.1 5 1701
          NR_038950.1
          AK057493.1 5 1629
          OA987740.1 5 1629
          OA987741.1 5 1673
          OA987742.1 5 1629
          OA987743.1 4 1591

          Target Gene Details

          Entrez Gene ID:

          9215

          Gene Name:

          LARGE xylosyl- and glucuronyltransferase 1

          Gene Aliases:

          LARGE, MDC1D, MDDGA6, MDDGB6

          Location:

          Chr.22:33066663-33922824 on Build GRCh38

          Assay Gene Location:

          Within Intron 9
          Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
          LARGE1 NM_001362949.2 NP_001349878.1
          NM_001362951.2 NP_001349880.1
          NM_001362953.2 NP_001349882.1
          NM_001378624.1 NP_001365553.1
          NM_001378625.1 NP_001365554.1
          NM_001378626.1 NP_001365555.1
          NM_001378627.1 NP_001365556.1
          NM_001378628.1 NP_001365557.1
          NM_001378629.1 NP_001365558.1
          NM_004737.7 NP_004728.1
          NM_133642.5 NP_598397.1
          XM_024452302.2 XP_024308070.1
          XM_024452303.2 XP_024308071.1
          XM_047441599.1 XP_047297555.1
          XM_047441600.1 XP_047297556.1
          XM_047441601.1 XP_047297557.1
          XM_047441602.1 XP_047297558.1
          XM_047441604.1 XP_047297560.1
          XM_047441605.1 XP_047297561.1
          AB011181.3 BAA25535.3
          AJ007583.1 CAA07571.1
          AK294766.1 BAH11875.1
          AK295636.1 BAH12135.1
          BC117425.1 AAI17426.1
          BC126404.1 AAI26405.1
          CR456510.1 CAG30396.1
          KJ534877.1 AHW56517.1
          KJ535033.1 AHW56672.1
          KJ535073.1 AHW56712.1
          KJ535074.1 AHW56713.1

          Target Copy Number Variation Details

          DGV Version:

          Release date: 2025-12-01, GRCh GRCh38
          Target
          Variation
          Location CNV
          Subtype
          Genes
          nsv1055791 Chr.22:33426240 - 33763549 on Build GRCh38 Loss MIR4764 LARGE-AS1 LARGE1 SNORA50B
          nsv6552249 Chr.22:33707612 - 33756938 on Build GRCh38 Deletion LARGE-AS1 LARGE1
          dgv4691n223 Chr.22:33699218 - 33802914 on Build GRCh38 Deletion LARGE-AS1 LARGE1 SNORA50B
          nsv1060684 Chr.22:33712476 - 33744666 on Build GRCh38 Loss LARGE-AS1 LARGE1
          nsv6547066 Chr.22:33728522 - 33738828 on Build GRCh38 Duplication LARGE-AS1 LARGE1
          nsv4273840 Chr.22:33712277 - 33740704 on Build GRCh38 Deletion LARGE-AS1 LARGE1
          nsv524432 Chr.22:33723880 - 33750381 on Build GRCh38 Loss LARGE-AS1 LARGE1
          nsv522709 Chr.22:33728990 - 33735167 on Build GRCh38 Gain LARGE-AS1 LARGE1
          nsv459878 Chr.22:33710759 - 33830604 on Build GRCh38 Loss LARGE-AS1 LARGE1
          esv2763261 Chr.22:33435362 - 33892401 on Build GRCh38 Loss MIR4764 LARGE-AS1 LARGE1 SNORA50B
          esv3568379 Chr.22:33458829 - 33815605 on Build GRCh38 Loss LARGE-AS1 LARGE1 SNORA50B
          nsv1055203 Chr.22:33702431 - 33800698 on Build GRCh38 Loss LARGE-AS1 LARGE1 SNORA50B

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          More Information


          Set Membership:

          Intragenic Exonic Intronic Non-exonic DGV Variation

          Gene Ontology Categories:

          Function(s) Process(es)

          blood vessel development
          behavioral fear response
          neuron migration
          N-acetylglucosamine metabolic process
          protein glycosylation
          protein O-linked glycosylation
          protein targeting to membrane
          glycosphingolipid biosynthetic process
          water transport
          intracellular protein transport
          striated muscle contraction
          plasma membrane organization
          cytoskeleton organization
          chemical synaptic transmission
          neuromuscular synaptic transmission
          brain development
          heart development
          muscle organ development
          neuromuscular junction development
          sensory perception of sound
          memory
          protein localization
          determination of adult lifespan
          glycoprotein metabolic process
          glycoprotein biosynthetic process
          response to light stimulus
          response to mechanical stimulus
          gene expression
          retina layer formation
          myotube differentiation
          dentate gyrus development
          nerve development
          principal sensory nucleus of trigeminal nerve development
          macrophage differentiation
          post-embryonic hindlimb morphogenesis
          multicellular organism growth
          protein O-linked mannosylation
          protein modification process
          myelination
          skeletal muscle tissue regeneration
          post-translational protein modification
          muscle cell cellular homeostasis
          regulation of synaptic plasticity
          astrocyte differentiation
          cardiac muscle tissue development
          skeletal muscle fiber development
          synapse organization
          neuromuscular process controlling posture
          neuromuscular process
          synaptic growth at neuromuscular junction
          localization of cell
          striated muscle cell development
          cardiac muscle cell development
          transmembrane transport
          retina development in camera-type eye
          limb development
          long-term synaptic potentiation
          bone development
          skeletal muscle organ development
          retina vasculature development in camera-type eye
          connective tissue development
          protein-containing complex assembly
          basement membrane organization
          potassium ion transmembrane transport
          protein localization to membrane
          protein localization to plasma membrane
          walking behavior
          acetylcholine receptor signaling pathway
          skeletal muscle fiber differentiation
          reactive gliosis
          catalytic activity
          protein binding
          acetylglucosaminyltransferase activity
          glucuronosyltransferase activity
          transferase activity
          transferase activity, transferring glycosyl groups
          transferase activity, transferring hexosyl groups
          manganese ion binding
          UDP-xylosyltransferase activity
          xylosyltransferase activity
          metal ion binding

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          Host server : magellan-search-blue-67655d8755-vzwvz:80/100.66.79.173:80.
          git-commit: dddaa802cd395f65bf1581942d0e97a089c38f41
          git-url: https://github.com/thermofisher/magellan-search
          git-branch: release/2.46.0-Offline