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          • Home
          • › Search Tool
          • › Search Results
          • › Hs05634703_cn
          See other DMD CNV Assays ›
          Gene Symbol
          DMD
          Assay Reference Genome
          Location

          Chr.X:33059527 on build GRCh38
          Cytoband
          Xp21.1
          Assay ID Hs05634703_cn
          Size
          Availability Made To Order
          Catalog # 4400291
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Target Gene Details

          Entrez Gene ID:

          1756

          Gene Name:

          dystrophin

          Gene Aliases:

          BMD, CMD3B, DXS142, DXS164, DXS206, DXS230, DXS239, DXS268, DXS269, DXS270, DXS272, MRX85

          Location:

          Chr.X:31119219-33339609 on Build GRCh38

          Assay Gene Location:

          Within Intron 3
          Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
          DMD NM_000109.3 NP_000100.2
          NM_004006.2 NP_003997.1
          NM_004009.3 NP_004000.1
          NM_004010.3 NP_004001.1
          XM_006724468.2 XP_006724531.1
          XM_006724469.3 XP_006724532.1
          XM_006724470.3 XP_006724533.1
          XM_006724473.2 XP_006724536.1
          XM_006724474.3 XP_006724537.1
          XM_006724475.2 XP_006724538.1
          XM_011545467.1 XP_011543769.1
          XM_011545468.2 XP_011543770.1
          XM_011545469.1 XP_011543771.1
          XM_017029328.1 XP_016884817.1
          XM_017029329.1 XP_016884818.1
          XM_017029330.1 XP_016884819.1
          AK309142.1
          BC009242.2 AAH09242.1
          BC036103.1 AAH36103.1
          M18533.1 AAA53189.1
          M63074.1 AAA52314.1
          S60972.1
          S64152.1
          X14298.1 CAA32479.1

          Target Copy Number Variation Details

          DGV Version:

          Release date: 2016-05-15, GRCh GRCh38
          Target
          Variation
          Location CNV
          Subtype
          Genes
          dgv508n21 Chr.X:33047771 - 33302495 on Build GRCh38 Gain DMD
          nsv522546 Chr.X:33057861 - 33095530 on Build GRCh38 Gain DMD

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          More Information


          Additional Information:

          For this assay, SNP(s) [rs149898416] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

          Set Membership:

          Intragenic Intronic Non-exonic DGV Variation

          Panther Classification:

          Molecular Function -

          ubiquitin-protein ligase

          Gene Ontology Categories:

          Function(s) Process(es)

          regulation of heart rate
          cytoskeleton organization
          muscle organ development
          regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum
          regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion
          regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion
          regulation of skeletal muscle contraction
          muscle attachment
          muscle filament sliding
          negative regulation of peptidyl-serine phosphorylation
          cellular protein localization
          response to muscle stretch
          peptide biosynthetic process
          cellular protein complex assembly
          muscle cell cellular homeostasis
          muscle fiber development
          cardiac muscle contraction
          regulation of ryanodine-sensitive calcium-release channel activity
          cardiac muscle cell action potential
          regulation of voltage-gated calcium channel activity
          negative regulation of peptidyl-cysteine S-nitrosylation
          positive regulation of sodium ion transmembrane transporter activity
          dystroglycan binding
          actin binding
          structural constituent of cytoskeleton
          protein binding
          zinc ion binding
          structural constituent of muscle
          myosin binding
          vinculin binding
          nitric-oxide synthase binding

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