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See other PTPRJ CNV Assays ›
Gene Symbol
PTPRJ
Assay Reference Genome
Location

Chr.11:48102911 on build GRCh38
Cytoband
11p11.2
Assay ID Hs06281480_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 5795

Gene Name:

 protein tyrosine phosphatase, receptor type J

Gene Aliases:

 CD148, DEP1, HPTPeta, R-PTP-ETA, SCC1

Location:

 Chr.11:47980504-48170842 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PTPRJ NM_001098503.1 NP_001091973.1
NM_002843.3 NP_002834.3
XM_017018083.1 XP_016873572.1
XM_017018084.1 XP_016873573.1
XM_017018085.1 XP_016873574.1
AL359057.1 CAB94390.1
BC063417.1 AAH63417.1
D37781.1 BAA07035.1
DR007037.1
U10886.1 AAB36687.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv1111n100 Chr.11:47653918 - 48644472 on Build GRCh38 Gain OR4X1 AGBL2 NUP160 PTPRJ FNBP4 OR4X2 OR4C3 OR4B1 MIR3161 OR4S1 OR4A47
dgv1112n100 Chr.11:48056312 - 48871655 on Build GRCh38 Gain OR4X1 PTPRJ OR4X2 OR4C3 OR4B1 MIR3161 OR4S1 OR4A47
nsv1053528 Chr.11:48064599 - 48104179 on Build GRCh38 Loss PTPRJ MIR3161
esv3891986 Chr.11:48021501 - 49282806 on Build GRCh38 Gain OR4X1 TRIM49B PTPRJ OR4X2 OR4B1 TRIM64C OR4S1 TRIM51CP OR4C3 TRIM53CP MIR3161 FOLH1 OR4A47
nsv554211 Chr.11:48084934 - 48673319 on Build GRCh38 Gain OR4X1 PTPRJ OR4X2 OR4C3 OR4B1 MIR3161 OR4S1 OR4A47

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