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See other KRTAP10-3 CNV Assays ›
Gene Symbol
KRTAP10-3
Assay Reference Genome
Location

Chr.21:44558028 on build GRCh38
Cytoband
Assay ID Hs00149817_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 386682

Gene Name:

 keratin associated protein 10-3

Gene Aliases:

 KAP10.3, KAP18-3, KAP18.3, KRTAP10.3, KRTAP18-3, KRTAP18.3

Location:

 Chr.21:44557790-44558795 on Build GRCh38

Assay Gene Location:

 Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
KRTAP10-3 NM_198696.3 1 768 NP_941969.2
AB076350.1 BAD01537.1
AJ566383.1 1 192 CAD97463.1
BC133677.1 AAI33678.1

Target Gene Details

Entrez Gene ID:

 54084

Gene Name:

 thrombospondin type laminin G domain and EAR repeats

Gene Aliases:

 C21orf29, DFNB98, ECTD14, STHAG10, TSP-EAR

Location:

 Chr.21:44497893-44711572 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TSPEAR NM_001272037.2 NP_001258966.1
NM_144991.3 NP_659428.2
AJ487962.1 CAD32309.1
BC021197.2 AAH21197.2
BC115415.1 AAI15416.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2025-12-01, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv6540525 Chr.21:44521952 - 44596004 on Build GRCh38 Duplication KRTAP10-6 KRTAP10-1 KRTAP10-5 KRTAP10-2 TSPEAR KRTAP10-4 KRTAP10-3
nsv587803 Chr.21:44514317 - 44569605 on Build GRCh38 Loss KRTAP10-1 TSPEAR-AS2 KRTAP10-2 TSPEAR KRTAP10-3 TSPEAR-AS1
esv3647132 Chr.21:44539529 - 44591271 on Build GRCh38 Gain KRTAP10-6 KRTAP10-1 KRTAP10-5 KRTAP10-2 TSPEAR KRTAP10-4 KRTAP10-3
esv2723638 Chr.21:44249174 - 44593709 on Build GRCh38 Deletion KRTAP10-6 KRTAP10-1 CFAP410 DNMT3L KRTAP10-2 TSPEAR KRTAP10-4 KRTAP10-3 TSPEAR-AS1 PFKL DNMT3L-AS1 KRTAP10-5 TRPM2-AS TRPM2 LRRC3-DT TSPEAR-AS2 AIRE LRRC3 LINC02575
nsv4288498 Chr.21:44551317 - 44558317 on Build GRCh38 Deletion KRTAP10-2 TSPEAR KRTAP10-3
nsv6535810 Chr.21:44473788 - 44670842 on Build GRCh38 Duplication KRTAP10-6 KRTAP10-1 KRTAP12-3 KRTAP12-2 KRTAP10-11 KRTAP10-2 KRTAP10-9 TSPEAR KRTAP10-7 KRTAP10-4 KRTAP10-10 KRTAP10-3 TSPEAR-AS1 KRTAP10-5 KRTAP10-8 TSPEAR-AS2 KRTAP12-4 LINC02575
nsv1055163 Chr.21:44475780 - 44646211 on Build GRCh38 Gain KRTAP10-6 KRTAP10-1 KRTAP10-2 KRTAP10-9 TSPEAR KRTAP10-7 KRTAP10-4 KRTAP10-10 KRTAP10-3 TSPEAR-AS1 KRTAP10-5 KRTAP10-8 TSPEAR-AS2 LINC02575
nsv6546352 Chr.21:44332501 - 44603700 on Build GRCh38 Deletion KRTAP10-6 KRTAP10-1 CFAP410 KRTAP10-2 TSPEAR KRTAP10-7 KRTAP10-4 KRTAP10-3 TSPEAR-AS1 KRTAP10-5 TRPM2-AS TRPM2 LRRC3-DT TSPEAR-AS2 LRRC3 LINC02575
esv33817 Chr.21:43749531 - 44647625 on Build GRCh38 Loss KRTAP10-6 CSTB KRTAP10-1 CFAP410 DNMT3L RRP1 KRTAP10-11 KRTAP10-2 AATBC KRTAP10-7 KRTAP10-10 KRTAP10-3 TSPEAR-AS1 PFKL DNMT3L-AS1 TRAPPC10 KRTAP10-5 TRPM2 LRRC3 LINC02575 LINC01678 ICOSLG AGPAT3 PWP2 KRTAP10-9 TSPEAR KRTAP10-4 PDXK TRPM2-AS LRRC3-DT KRTAP10-8 TSPEAR-AS2 GATD3 AIRE LOC105372832
nsv4283103 Chr.21:43950580 - 44658488 on Build GRCh38 Duplication KRTAP10-6 KRTAP10-1 CFAP410 DNMT3L KRTAP10-11 KRTAP10-2 KRTAP10-7 KRTAP10-10 KRTAP10-3 TSPEAR-AS1 PFKL DNMT3L-AS1 TRAPPC10 KRTAP10-5 TRPM2 KRTAP12-4 LRRC3 LINC02575 LINC01678 ICOSLG KRTAP12-3 AGPAT3 PWP2 KRTAP10-9 TSPEAR KRTAP10-4 TRPM2-AS LRRC3-DT KRTAP10-8 TSPEAR-AS2 GATD3 AIRE LOC105372832
dgv4435n100 Chr.21:44527151 - 44595409 on Build GRCh38 Gain KRTAP10-6 KRTAP10-1 KRTAP10-5 KRTAP10-2 TSPEAR KRTAP10-4 KRTAP10-3

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More Information


Set Membership:

 Intragenic Exonic Intronic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s)


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