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          • Home
          • › Search Tool
          • › Search Results
          • › Hs01458815_cn
          See other EIF4A3 CNV Assays ›
          Gene Symbol
          EIF4A3
          Assay Reference Genome
          Location

          Chr.17:80138226 on build GRCh38
          Cytoband
          17q25.3
          Assay ID Hs01458815_cn
          Size
          Availability Made To Order
          Catalog # 4400291
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Target Gene Details

          Entrez Gene ID:

          9775

          Gene Name:

          eukaryotic translation initiation factor 4A3

          Gene Aliases:

          DDX48, MUK34, NMP265, NUK34, RCPS, eIF4AIII

          Location:

          Chr.17:80135214-80147183 on Build GRCh38

          Assay Gene Location:

          Within Exon 8
          Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
          EIF4A3 NM_014740.3 8 1005 NP_055555.1
          XM_011525522.1 7 898 XP_011523824.1
          AK290608.1 8 986
          BC003662.2 8 915 AAH03662.1
          BC004386.1 8 936 AAH04386.1
          BC011151.1 8 940 AAH11151.1
          CR456750.1 8 783 CAG33031.1
          CR749455.1 1 1262
          D21853.1 8 997
          X79538.1 8 856 CAA56074.1

          Target Copy Number Variation Details

          DGV Version:

          Release date: 2016-05-15, GRCh GRCh38
          Target
          Variation
          Location CNV
          Subtype
          Genes
          nsv1066606 Chr.17:79955666 - 80224006 on Build GRCh38 Gain CCDC40 TBC1D16 MIR1268B SGSH CARD14 GAA SLC26A11 LOC105371920 EIF4A3
          nsv469591 Chr.17:80085322 - 80293486 on Build GRCh38 Loss CCDC40 MIR1268B SGSH CARD14 GAA RNF213 SLC26A11 LOC105371920 EIF4A3
          nsv833561 Chr.17:79977946 - 80167051 on Build GRCh38 Loss CCDC40 TBC1D16 MIR1268B GAA EIF4A3
          nsv833562 Chr.17:80114523 - 80301339 on Build GRCh38 Loss SGSH CARD14 GAA RNF213 SLC26A11 LOC105371920 EIF4A3

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          More Information


          Set Membership:

          Intragenic Exonic DGV Variation

          Gene Ontology Categories:

          Function(s) Process(es)

          nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
          nuclear-transcribed mRNA poly(A) tail shortening
          mRNA splicing, via spliceosome
          rRNA processing
          termination of RNA polymerase II transcription
          RNA export from nucleus
          mRNA export from nucleus
          associative learning
          RNA splicing
          RNA secondary structure unwinding
          response to organic cyclic compound
          selenocysteine metabolic process
          negative regulation of translation
          mRNA 3'-end processing
          exploration behavior
          positive regulation of translation
          embryonic cranial skeleton morphogenesis
          cellular response to selenite ion
          negative regulation of excitatory postsynaptic potential
          negative regulation of selenocysteine incorporation
          negative regulation of selenocysteine insertion sequence binding
          cellular response to brain-derived neurotrophic factor stimulus
          mRNA binding
          ATP-dependent RNA helicase activity
          protein binding
          ATP binding
          poly(A) binding
          selenocysteine insertion sequence binding
          RNA stem-loop binding
          ribonucleoprotein complex binding
          poly(A) RNA binding

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