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See other ATP6V0C CNV Assays ›
Gene Symbol
ATP6V0C
Assay Reference Genome
Location

Chr.16:2519375 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01542036_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 527

Gene Name:

 ATPase H+ transporting V0 subunit c

Gene Aliases:

 ATP6C, ATP6L, ATPL, VATL, VPPC, Vma3

Location:

 Chr.16:2513726-2520223 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 3 - Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ATP6V0C NM_001198569.1 NP_001185498.1
NM_001694.3 NP_001685.1
AW161158.1
BC004537.2 AAH04537.1
BC007389.2 AAH07389.1
BC007759.2 AAH07759.1
BC009290.2 AAH09290.1
BI548787.1
BT007155.1 AAP35819.1
CR541930.1 CAG46728.1
CR541951.1 CAG46749.1
M62762.1 AAA60039.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication TPSD1 TSC2 E4F1 MRPL28 WFIKKN1 SNRNP25 METTL26 TMEM204 EME2 MIR662 ARHGDIG RPL3L HBA1 SOX8 RAB11FIP3 CAPN15 RPS2 LOC729652 POLR3K NOXO1 WDR90 LUC7L UBE2I AMDHD2 GFER ATP6V0C PRSS29P ECI1 MAPK8IP3 IGFALS RGS11 LOC106660606 LOC105371184 MIR6768 PRR25 MLST8 JMJD8 FLJ42627 NHLRC4 SNHG19 SNORA64 NTHL1 ZNF598 LOC107987233 GNPTG LINC00254 LOC107984876 RNF151 LOC105371038 MIR4717 NARFL C16orf91 TRAF7 PDPK1 CHTF18 MIR3176 C16orf59 BRICD5 HBZ DECR2 HAGH HBM MSLN ABCA3 LOC105371049 NUBP2 NTN3 HAGHL WDR24 MIR6511B1 MIR4516 MIR6859-4 DNASE1L2 CCNF UNKL MRPS34 SNORD60 GNG13 METRN MIR3177 TBC1D24 MSRB1 MPG SNORA78 SSTR5-AS1 SNHG9 CCDC78 PTX4 MEIOB HBA2 C1QTNF8 LINC00235 AXIN1 LOC105371045 SSTR5 MIR3178 SNORA10 RHBDL1 FAM234A PDIA2 KCTD5 CRAMP1 STUB1 CEMP1 LOC100287175 FBXL16 LOC105371046 TPSB2 PRSS27 MIR5587 LOC652276 RPUSD1 HN1L RPL23AP5 TELO2 CCDC154 FAM173A NDUFB10 SYNGR3 LOC100134368 TPSG1 WASIR2 ABCA17P TSR3 IFT140 RNPS1 TPSAB1 BAIAP3 DDX11L10 CASKIN1 CACNA1H PKD1 LMF1 RHOT2 RHBDF1 NME3 ERVK13-1 FAHD1 TMEM8A PIGQ CLCN7 LOC105371047 PRR35 NPW PGP MIR3180-5 HBQ1 LMF1-AS1 RAB26 MCRIP2 NPRL3 MIR940 MIR3677 RAB40C MIR6767 TBL3 SLC9A3R2 MIR1225 NME4 LOC101929280 SPSB3 HS3ST6
esv2760067 Chr.16:2486824 - 2820535 on Build GRCh38 Gain+Loss PDPK1 MIR3178 PRSS21 TBC1D24 SRRM2 KCTD5 CEMP1 SRRM2-AS1 FLJ42627 TCEB2 PRSS27 AMDHD2 LOC652276 PRSS33 PRSS41 ATP6V0C ERVK13-1
nsv833122 Chr.16:2501717 - 2663937 on Build GRCh38 Loss FLJ42627 AMDHD2 PDPK1 MIR3178 LOC652276 ATP6V0C ERVK13-1 TBC1D24 CEMP1
nsv1052260 Chr.16:2074546 - 2629655 on Build GRCh38 Gain DNASE1L2 CCNF TSC2 SNORD60 E4F1 LOC106660606 ABCA17P MIR6768 TBC1D24 RNPS1 MLST8 CASKIN1 PKD1 SNHG19 LOC729652 MIR4717 TRAF7 PDPK1 MIR3178 PGP C16orf59 BRICD5 MIR3180-5 RAB26 ABCA3 CEMP1 LOC105371049 MIR940 MIR3677 NTN3 AMDHD2 MIR6767 LOC652276 MIR1225 ATP6V0C MIR6511B1 ECI1 MIR4516

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