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See other CHD1L CNV Assays ›
Gene Symbol
CHD1L
Assay Reference Genome
Location

Chr.1:147199376 on build GRCh38
Cytoband
Assay ID Hs03371151_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 9557

Gene Name:

 chromodomain helicase DNA binding protein 1 like

Gene Aliases:

 ALC1, CHDL

Location:

 Chr.1:147172747-147295762 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHD1L NM_001348451.2 NP_001335380.1
OA985492.1
OA985493.1

Target Gene Details

Entrez Gene ID:

 2330

Gene Name:

 flavin containing dimethylaniline monoxygenase 5

Gene Aliases:

 hBVMO1

Location:

 Chr.1:147184305-147227284 on Build GRCh38

Assay Gene Location:

 Within Intron 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FMO5 NM_001144829.3 NP_001138301.1
NM_001144830.3 NP_001138302.1
NM_001461.4 NP_001452.2
XM_005272946.6 XP_005273003.1
XM_005272947.6 XP_005273004.1
XM_005272948.6 XP_005273005.1
XM_011509350.4 XP_011507652.1
XM_011509351.4 XP_011507653.1
XM_017000801.3 XP_016856290.1
XM_017000802.3 XP_016856291.1
XM_047416250.1 XP_047272206.1
AK222728.1 BAD96448.1
AK225739.1
AK314647.1 BAG37208.1
BC035687.1 AAH35687.1
L37080.1 AAA67849.1
Z47553.1 CAA87633.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2025-12-01, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1005055 Chr.1:145642988 - 148991068 on Build GRCh38 Loss NUDT4B MIR5087 RNVU1-1 RNVU1-27 LINC02806 LINC01138 NBPF11 PDE4DIPP1 CHD1L LINC01731 MIR6077 ITGA10 LOC728989 NUDT17 CD160 GNRHR2 RNVU1-6 LIX1L PDE4DIP LINC02805 POLR3GL NUDT4P2 PIAS3 NOTCH2NLB NBPF12 ANKRD35 RNVU1-8 MIR6736 PDE4DIPP6 PDIA3P1 POLR3C GPR89A LOC128071544 RNVU1-2 TXNIP GPR89B GJA8 RNVU1-7 ANKRD34A RNVU1-3 FMO5 PDZK1P1 PPIAL4H ACP6 LIX1L-AS1 LOC101927468 LINC01719 PRKAB2 NBPF14 PPIAL4G PEX11B PDZK1 SEC22B3P RNF115 NBPF10 NOTCH2NLA HYDIN2 NBPF13P BCL9 GJA5 LINC00624 RBM8A HJV
dgv327n100 Chr.1:146028214 - 148860637 on Build GRCh38 Gain NUDT4B PDE4DIPP6 MIR5087 RNVU1-1 PDIA3P1 RNVU1-27 LINC02806 LINC01138 NBPF11 PDE4DIPP1 LOC128071544 RNVU1-2 CHD1L GPR89B GJA8 LINC01731 MIR6077 RNVU1-7 LOC728989 RNVU1-3 RNVU1-6 FMO5 PDE4DIP PDZK1P1 LINC02805 PPIAL4H ACP6 NUDT4P2 LOC101927468 LINC01719 PRKAB2 NOTCH2NLB NBPF14 PPIAL4G SEC22B3P NBPF10 NOTCH2NLA HYDIN2 NBPF13P NBPF12 BCL9 GJA5 RNVU1-8 LINC00624
esv2761299 Chr.1:146068341 - 148926801 on Build GRCh38 Gain+Loss NUDT4B PDE4DIPP6 MIR5087 RNVU1-1 PDIA3P1 RNVU1-27 LINC02806 LINC01138 NBPF11 PDE4DIPP1 LOC128071544 RNVU1-2 CHD1L GPR89B GJA8 LINC01731 MIR6077 RNVU1-7 LOC728989 RNVU1-3 FMO5 PDE4DIP PDZK1P1 LINC02805 PPIAL4H ACP6 NUDT4P2 LOC101927468 PRKAB2 NOTCH2NLB NBPF14 PPIAL4G SEC22B3P NBPF10 NOTCH2NLA HYDIN2 NBPF13P NBPF12 BCL9 GJA5 RNVU1-8 LINC00624
nsv1121713 Chr.1:147010816 - 147207577 on Build GRCh38 Deletion FMO5 CHD1L PDIA3P1 PRKAB2 NBPF13P LOC728989 RNVU1-8
nsv509457 Chr.1:145948024 - 149021821 on Build GRCh38 Insertion NUDT4B MIR5087 RNVU1-1 RNVU1-27 LINC02806 LINC01138 NBPF11 PDE4DIPP1 CHD1L LINC01731 MIR6077 LOC728989 RNVU1-6 LIX1L PDE4DIP LINC02805 POLR3GL NUDT4P2 NOTCH2NLB NBPF12 RNVU1-8 PDE4DIPP6 PDIA3P1 LOC128071544 RNVU1-2 TXNIP GPR89B GJA8 RNVU1-7 ANKRD34A RNVU1-3 FMO5 PDZK1P1 PPIAL4H ACP6 LOC101927468 LINC01719 PRKAB2 NBPF14 PPIAL4G SEC22B3P NBPF10 NOTCH2NLA HYDIN2 NBPF13P BCL9 GJA5 LINC00624 HJV
nsv1132304 Chr.1:146186094 - 148977674 on Build GRCh38 Duplication NUDT4B PDE4DIPP6 MIR5087 RNVU1-1 PDIA3P1 RNVU1-27 LINC02806 LINC01138 NBPF11 PDE4DIPP1 LOC128071544 RNVU1-2 CHD1L GPR89B GJA8 LINC01731 MIR6077 RNVU1-7 LOC728989 RNVU1-3 FMO5 PDE4DIP PDZK1P1 LINC02805 PPIAL4H ACP6 NUDT4P2 LOC101927468 PRKAB2 NOTCH2NLB NBPF14 PPIAL4G SEC22B3P NOTCH2NLA HYDIN2 NBPF13P NBPF12 BCL9 GJA5 RNVU1-8 LINC00624
nsv1003688 Chr.1:146036817 - 148934526 on Build GRCh38 Gain NUDT4B PDE4DIPP6 MIR5087 RNVU1-1 PDIA3P1 RNVU1-27 LINC02806 LINC01138 NBPF11 PDE4DIPP1 LOC128071544 RNVU1-2 CHD1L GPR89B GJA8 LINC01731 MIR6077 RNVU1-7 LOC728989 RNVU1-3 RNVU1-6 FMO5 PDE4DIP PDZK1P1 LINC02805 PPIAL4H ACP6 NUDT4P2 LOC101927468 LINC01719 PRKAB2 NOTCH2NLB NBPF14 PPIAL4G SEC22B3P NBPF10 NOTCH2NLA HYDIN2 NBPF13P NBPF12 BCL9 GJA5 RNVU1-8 LINC00624
nsv5881371 Chr.1:145648753 - 147971330 on Build GRCh38 Deletion PDIA3P1 POLR3C GPR89A LOC128071544 TXNIP CHD1L GPR89B GJA8 ITGA10 ANKRD34A LOC728989 NUDT17 CD160 GNRHR2 RNVU1-6 FMO5 LIX1L PPIAL4H ACP6 POLR3GL LIX1L-AS1 NUDT4P2 LINC01719 PRKAB2 PIAS3 PEX11B PDZK1 RNF115 NBPF10 NOTCH2NLA HYDIN2 NBPF13P NBPF12 BCL9 GJA5 ANKRD35 RNVU1-8 MIR6736 LINC00624 RBM8A HJV
dgv66e199 Chr.1:146055970 - 149056514 on Build GRCh38 Deletion NUDT4B PDE4DIPP6 MIR5087 RNVU1-1 PDIA3P1 RNVU1-27 LINC02806 LINC01138 NBPF11 PDE4DIPP1 LOC128071544 RNVU1-2 CHD1L GPR89B GJA8 LINC01731 MIR6077 RNVU1-7 LOC728989 RNVU1-3 FMO5 PDE4DIP NBPF9 PDZK1P1 LINC02805 PPIAL4H ACP6 NUDT4P2 LOC101927468 LINC01719 PRKAB2 NOTCH2NLB NBPF14 PPIAL4G SEC22B3P NBPF10 NOTCH2NLA HYDIN2 NBPF13P NBPF12 BCL9 GJA5 RNVU1-8 LINC00624
nsv6333880 Chr.1:145488103 - 148061210 on Build GRCh38 Deletion PDIA3P1 POLR3C GPR89A PDE4DIPP1 LOC128071544 TXNIP CHD1L GPR89B GJA8 ITGA10 RNVU1-7 ANKRD34A LOC728989 NUDT17 CD160 GNRHR2 RNVU1-6 FMO5 LIX1L PDZK1P1 PPIAL4H ACP6 POLR3GL LIX1L-AS1 NUDT4P2 LINC01719 PRKAB2 PIAS3 PEX11B PDZK1 NBPF25P RNF115 NBPF10 NOTCH2NLA HYDIN2 NBPF13P NBPF12 BCL9 GJA5 ANKRD35 RNVU1-8 MIR6736 LINC00624 RBM8A HJV
nsv437047 Chr.1:147171976 - 147369886 on Build GRCh38 Loss FMO5 CHD1L PDIA3P1 PRKAB2
nsv4061277 Chr.1:147017441 - 147294818 on Build GRCh38 Deletion FMO5 CHD1L PDIA3P1 PRKAB2 NBPF13P LOC728989 RNVU1-8

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More Information


Additional Information:

For this assay, SNP(s) [rs72708586] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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