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See other RNF223 CNV Assays ›
Gene Symbol
RNF223
Assay Reference Genome
Location

Chr.1:1070534 on build GRCh38
Cytoband
1p36.33
Assay ID Hs03386944_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 401934

Gene Name:

 ring finger protein 223

Gene Aliases:

 -

Location:

 Chr.1:1065635-1074307 on Build GRCh38

Assay Gene Location:

 Within Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
RNF223 XM_017001286.1 2 2334 XP_016856775.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv945741 Chr.1:1007194 - 1092619 on Build GRCh38 Duplication LOC100288175 LOC105378948 RNF223 AGRN ISG15 C1orf159
nsv509146 Chr.1:1010510 - 1111188 on Build GRCh38 Insertion LOC100288175 LOC105378948 RNF223 AGRN ISG15 C1orf159
esv2762302 Chr.1:914637 - 1106320 on Build GRCh38 Gain SAMD11 RNF223 PLEKHN1 HES4 ISG15 LOC107985728 LOC100288175 LOC105378948 LOC100130417 KLHL17 AGRN PERM1 LOC284600 NOC2L C1orf159
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss LOC100133331 DDX11L1 RNF223 PLEKHN1 LOC100288069 LOC105378592 ATAD3B TNFRSF4 MORN1 LOC100288175 GNB1 VWA1 SSU72 CFAP74 TMEM52 MIB2 ATAD3A LOC105378949 LOC105378589 CDK11A CPSF3L LOC101928626 TMEM88B LINC00115 NADK AGRN C1orf159 LOC107985729 MIR200B PUSL1 MMP23B LINC01342 LOC107985728 GABRD SLC35E2B FAM87B CPTP TMEM240 MIR6859-2 SCNN1D TAS1R3 OR4F5 PRKCZ TTLL10 LOC100506504 ACAP3 SAMD11 MMP23A WASH7P DVL1 SKI TNFRSF18 LOC100129534 LOC100287934 MIR6808 SLC35E2 MXRA8 B3GALT6 MTND1P23 FAM132A LOC105378947 MRPL20 MIR429 CALML6 LOC100130417 FAAP20 CDK11B MIR6859-1 OR4F29 MIR200A LOC102725121 LOC102724312 FAM138A MIR6726 TTLL10-AS1 LINC01128 MIR6723 ANKRD65 CCNL2 LOC100132287 AURKAIP1 LOC148413 MIR6727 LOC729737 MIR1302-2 LOC107984841 UBE2J2 KLHL17 PERM1 FAM41C ATAD3C NOC2L FNDC10 OR4F16 HES4 ISG15 MTND2P28 LOC105378591 LOC105378948 SDF4 LOC284600 LOC100134822
nsv950451 Chr.1:899421 - 1094520 on Build GRCh38 Deletion SAMD11 RNF223 PLEKHN1 HES4 ISG15 LOC107985728 LOC100288175 LOC105378948 LOC100130417 KLHL17 AGRN PERM1 LOC284600 NOC2L C1orf159
nsv1003578 Chr.1:1068249 - 1282706 on Build GRCh38 Gain TNFRSF18 TTLL10 MIR200B B3GALT6 MIR200A RNF223 FAM132A LINC01342 TNFRSF4 MIR429 TTLL10-AS1 LOC105378948 UBE2J2 SCNN1D SDF4 C1orf159
nsv544947 Chr.1:1070426 - 1306704 on Build GRCh38 Loss TNFRSF18 TTLL10 MIR200B B3GALT6 MIR200A ACAP3 RNF223 FAM132A LINC01342 MIR6726 TNFRSF4 MIR429 TTLL10-AS1 UBE2J2 SCNN1D SDF4 C1orf159
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain TNFRSF18 MIR200B RNF223 PLEKHN1 LINC01342 TNFRSF4 MIR429 LOC107985728 LOC100288175 LOC100130417 KLHL17 PERM1 FAM41C NOC2L TTLL10 MIR200A SAMD11 HES4 ISG15 TTLL10-AS1 LOC105378948 AGRN SDF4 LOC284600 C1orf159
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication TNFRSF18 MIR6727 MIR200B PUSL1 B3GALT6 RNF223 FAM132A LINC01342 TNFRSF4 MIR429 LOC100288175 CPTP UBE2J2 SCNN1D TAS1R3 TTLL10 MIR200A ACAP3 MIR6726 CPSF3L TTLL10-AS1 LOC105378948 AGRN SDF4 C1orf159
dgv5n100 Chr.1:585989 - 1114424 on Build GRCh38 Gain LOC100133331 LOC100287934 MTND1P23 RNF223 PLEKHN1 LOC105378947 LOC100288069 LOC107984841 LOC107985728 FAM87B LOC100288175 LOC100130417 KLHL17 PERM1 FAM41C NOC2L OR4F16 SAMD11 HES4 ISG15 LOC101928626 MTND2P28 LINC01128 LOC105378948 LINC00115 AGRN MIR6723 LOC284600 C1orf159
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss TNFRSF18 LOC100287934 MIR6808 SLC35E2 MXRA8 B3GALT6 RNF223 PLEKHN1 FAM132A LOC100288069 MRPL20 ATAD3B TNFRSF4 MIR429 LOC100288175 LOC100130417 VWA1 SSU72 CDK11B MIR200A MIB2 ATAD3A LOC102724312 MIR6726 CDK11A CPSF3L TMEM88B TTLL10-AS1 LINC01128 LINC00115 NADK AGRN ANKRD65 C1orf159 CCNL2 AURKAIP1 LOC107985729 LOC148413 MIR6727 MIR200B PUSL1 MMP23B LINC01342 LOC107985728 SLC35E2B FAM87B CPTP UBE2J2 KLHL17 TMEM240 PERM1 SCNN1D FAM41C TAS1R3 ATAD3C NOC2L FNDC10 TTLL10 ACAP3 SAMD11 MMP23A HES4 ISG15 DVL1 LOC105378948 SDF4 LOC284600
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss TNFRSF18 MIR200B B3GALT6 RNF223 PLEKHN1 FAM132A LINC01342 TNFRSF4 MIR429 LOC107985728 FAM87B LOC100288175 UBE2J2 LOC100130417 KLHL17 PERM1 FAM41C NOC2L TTLL10 MIR200A SAMD11 HES4 ISG15 TTLL10-AS1 LINC01128 LOC105378948 LINC00115 AGRN SDF4 LOC284600 C1orf159
nsv1013524 Chr.1:939510 - 1161955 on Build GRCh38 Gain SAMD11 RNF223 PLEKHN1 LINC01342 HES4 ISG15 LOC100288175 LOC105378948 KLHL17 AGRN PERM1 NOC2L C1orf159
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain CCNL2 TNFRSF18 AURKAIP1 LOC148413 MIR6727 MIR6808 MXRA8 MIR200B PUSL1 B3GALT6 RNF223 PLEKHN1 FAM132A LINC01342 MRPL20 TNFRSF4 MIR429 LOC107985728 LOC100288175 CPTP UBE2J2 LOC100130417 KLHL17 PERM1 SCNN1D TAS1R3 NOC2L TTLL10 MIR200A ACAP3 SAMD11 HES4 ISG15 MIR6726 CPSF3L TMEM88B TTLL10-AS1 DVL1 LOC105378948 AGRN SDF4 LOC284600 ANKRD65 C1orf159
nsv1160644 Chr.1:939652 - 1220663 on Build GRCh38 Deletion TNFRSF18 TTLL10 MIR200B MIR200A SAMD11 RNF223 PLEKHN1 LINC01342 HES4 ISG15 TNFRSF4 MIR429 TTLL10-AS1 LOC100288175 LOC105378948 KLHL17 AGRN PERM1 SDF4 NOC2L C1orf159

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Gene Ontology Categories:

Process(es)


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