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See other TCAF2 CNV Assays ›
Gene Symbol
TCAF2
Assay Reference Genome
Location

Chr.7:143728787 on build GRCh38
Cytoband
Assay ID Hs03621341_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 285966

Gene Name:

 TRPM8 channel associated factor 2

Gene Aliases:

 FAM115C, FAM139A, GATD9, GATD9B

Location:

 Chr.7:244454-274729 on Build GRCh38

Assay Gene Location:

 Within Exon 15
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TCAF2 NM_001130026.3 8 3592 NP_001123498.2
NM_001363538.2 8 3938 NP_001350467.1
NM_001438662.2 8 3941
NM_001438663.2 9 4054
NM_001438664.1 7 3304
NM_001438665.1 8 3562
NM_001438666.1 8 3459
XM_047420217.1 7 3894 XP_047276173.1
XM_047420218.1 7 3621 XP_047276174.1
AK090395.1 6 3055 BAC03376.1
DC402602.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2025-12-01, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv6702n100 Chr.7:143514550 - 143850167 on Build GRCh38 Gain LOC154761 CTAGE15 CTAGE6 EPHA1-AS1 TCAF2 TCAF2P1
esv3572224 Chr.7:143728626 - 143733111 on Build GRCh38 Loss TCAF2
dgv249n111 Chr.7:143520153 - 143728794 on Build GRCh38 Duplication CTAGE15 EPHA1-AS1 TCAF2
nsv6426680 Chr.7:143727001 - 143743200 on Build GRCh38 Duplication TCAF2
esv29816 Chr.7:143519431 - 143875498 on Build GRCh38 Gain+Loss LOC154761 CTAGE15 CTAGE6 EPHA1-AS1 TCAF1 TCAF2 TCAF2P1
nsv1033465 Chr.7:143711325 - 143827101 on Build GRCh38 Gain LOC154761 CTAGE6 TCAF2 TCAF2P1
nsv4155464 Chr.7:143726407 - 143743407 on Build GRCh38 Deletion TCAF2
nsv608685 Chr.7:143728268 - 143740341 on Build GRCh38 Loss TCAF2
nsv819199 Chr.7:143703652 - 143753212 on Build GRCh38 Gain TCAF2
esv3615306 Chr.7:143728246 - 143743547 on Build GRCh38 Loss TCAF2
nsv3116441 Chr.7:143728212 - 143847008 on Build GRCh38 Duplication LOC154761 CTAGE6 TCAF2 TCAF2P1
nsv5483538 Chr.7:143725804 - 143744402 on Build GRCh38 Deletion TCAF2
nsv8227 Chr.7:143519748 - 144378447 on Build GRCh38 Gain+Loss OR2A7 OR2F1 OR2A12 OR2A25 OR2A5 OR2A1 TCAF2 OR2A2 OR6B1 ARHGEF35 OR2A14 CTAGE8 OR2A1-AS1 ARHGEF5 CTAGE6 OR2F2 OR2A20P EPHA1-AS1 ARHGEF35-AS1 LOC154761 OR2A9P OR2A42 CTAGE4 TCAF2P1 ARHGEF34P CTAGE15 TCAF1
dgv6706n100 Chr.7:143521753 - 143875193 on Build GRCh38 Loss LOC154761 CTAGE15 CTAGE6 EPHA1-AS1 TCAF1 TCAF2 TCAF2P1
nsv3169919 Chr.7:143521765 - 143875073 on Build GRCh38 Duplication LOC154761 CTAGE15 CTAGE6 EPHA1-AS1 TCAF1 TCAF2 TCAF2P1
esv2759570 Chr.7:143450682 - 144671545 on Build GRCh38 Gain+Loss OR2A7 OR2F1 OR2A12 OR2A25 OR2A5 OR2A1 NOBOX TCAF2 OR2A2 OR6B1 ARHGEF35 OR2A14 CTAGE8 OR2A1-AS1 ARHGEF5 CTAGE6 OR2F2 OR2A20P EPHA1-AS1 ARHGEF35-AS1 LOC154761 OR2A9P OR10AC1 OR2A42 CTAGE4 TCAF2P1 TAS2R41 ARHGEF34P TPK1 CTAGE15 TCAF1
nsv1034865 Chr.7:143582086 - 143835893 on Build GRCh38 Gain LOC154761 CTAGE6 TCAF2 TCAF2P1
nsv608682 Chr.7:143444382 - 144177097 on Build GRCh38 Gain LOC154761 OR10AC1 OR2F1 OR2A12 OR2A25 OR2A5 TAS2R60 TCAF2 OR2A2 TCAF2P1 OR6B1 TAS2R41 OR2A14 CTAGE15 CTAGE6 OR2F2 EPHA1-AS1 TCAF1
esv3891222 Chr.7:143719827 - 143784885 on Build GRCh38 Gain+Loss CTAGE6 TCAF2
nsv1022655 Chr.7:143700937 - 143755783 on Build GRCh38 Gain CTAGE6 TCAF2
dgv6700n100 Chr.7:143512758 - 143881082 on Build GRCh38 Gain LOC154761 CTAGE15 CTAGE6 EPHA1-AS1 TCAF1 TCAF2 TCAF2P1
esv2422489 Chr.7:143510941 - 144038942 on Build GRCh38 Duplication LOC154761 OR10AC1 OR2F1 CTAGE15 CTAGE6 OR2F2 EPHA1-AS1 TCAF1 TCAF2 TCAF2P1 OR6B1
nsv514455 Chr.7:143526465 - 143843910 on Build GRCh38 Gain+Loss LOC154761 CTAGE15 CTAGE6 TCAF2 TCAF2P1
nsv608684 Chr.7:143558678 - 143865355 on Build GRCh38 Loss LOC154761 CTAGE15 CTAGE6 TCAF1 TCAF2 TCAF2P1
dgv6709n100 Chr.7:143728285 - 143833864 on Build GRCh38 Loss LOC154761 CTAGE6 TCAF2 TCAF2P1
nsv1029557 Chr.7:143525976 - 143850167 on Build GRCh38 Gain+Loss LOC154761 CTAGE15 CTAGE6 TCAF2 TCAF2P1
esv2761113 Chr.7:143525988 - 143850179 on Build GRCh38 Gain+Loss LOC154761 CTAGE15 CTAGE6 TCAF2 TCAF2P1
nsv4167267 Chr.7:143727907 - 143732907 on Build GRCh38 Duplication TCAF2
nsv3216032 Chr.7:143584113 - 143785255 on Build GRCh38 Deletion CTAGE6 TCAF2
nsv824356 Chr.7:143728291 - 143737585 on Build GRCh38 Loss TCAF2
nsv4162632 Chr.7:143723907 - 143742907 on Build GRCh38 Duplication TCAF2
dgv12n29 Chr.7:143521853 - 143780253 on Build GRCh38 Gain+Loss CTAGE15 CTAGE6 EPHA1-AS1 TCAF2
nsv1156740 Chr.7:143521875 - 143846758 on Build GRCh38 Duplication LOC154761 CTAGE15 CTAGE6 EPHA1-AS1 TCAF2 TCAF2P1
dgv6707n100 Chr.7:143549301 - 143773176 on Build GRCh38 Loss CTAGE15 CTAGE6 TCAF2

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