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          • › Hs04072990_cn
          See other TRPM2 CNV Assays ›
          Gene Symbol
          TRPM2
          Assay Reference Genome
          Location

          Chr.21:44422323 on build GRCh38
          Cytoband
          Assay ID Hs04072990_cn
          Size
          Availability Made To Order
          Catalog # 4400291
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Target Gene Details

          Entrez Gene ID:

          7226

          Gene Name:

          transient receptor potential cation channel subfamily M member 2

          Gene Aliases:

          EREG1, KNP3, LTRPC2, LTrpC-2, NUDT9H, NUDT9L1, TRPC7

          Location:

          Chr.21:44350141-44442644 on Build GRCh38

          Assay Gene Location:

          Within Exon 25
          Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
          TRPM2 NM_001320350.2 23 3595 NP_001307279.2
          NM_001320351.2 NP_001307280.2
          NM_001433516.1 NP_001420445.1
          NM_003307.4 NP_003298.2
          NR_038257.2
          XM_011529736.3 XP_011528038.1
          XM_017028457.3 XP_016883946.1
          XM_047440977.1 XP_047296933.1
          XM_047440978.1 XP_047296934.1
          AB001535.1 BAA34700.1
          AB166745.1 BAD83705.1
          AB166746.1 BAD83706.1
          AJ417076.1 CAD01139.1
          AJ878416.1 CAI47593.1
          AK301451.1 BAG62975.1
          BC112342.1 23 3528 AAI12343.1

          Target Gene Details

          Entrez Gene ID:

          101928607

          Gene Name:

          TRPM2 antisense RNA

          Gene Aliases:

          TRPM2-AS1

          Location:

          Chr.21:44414590-44425563 on Build GRCh38

          Assay Gene Location:

          Within Intron 2
          Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
          TRPM2-AS NR_109964.1
          EU362988.1

          Target Copy Number Variation Details

          DGV Version:

          Release date: 2025-12-01, GRCh GRCh38
          Target
          Variation
          Location CNV
          Subtype
          Genes
          nsv953646 Chr.21:44279118 - 44523117 on Build GRCh38 Deletion CFAP410 TSPEAR PFKL TSPEAR-AS2 TSPEAR-AS1 LRRC3-DT TRPM2 AIRE TRPM2-AS LRRC3 LINC02575
          nsv519245 Chr.21:44413029 - 44429252 on Build GRCh38 Loss TRPM2 TRPM2-AS
          nsv1058359 Chr.21:44304172 - 44547662 on Build GRCh38 Gain CFAP410 TSPEAR PFKL TSPEAR-AS2 TSPEAR-AS1 KRTAP10-1 LRRC3-DT TRPM2 TRPM2-AS LRRC3 LINC02575
          nsv3247129 Chr.21:44394755 - 44424397 on Build GRCh38 Insertion TRPM2 TRPM2-AS
          esv2723638 Chr.21:44249174 - 44593709 on Build GRCh38 Deletion CFAP410 PFKL TSPEAR-AS1 KRTAP10-1 KRTAP10-4 LRRC3-DT KRTAP10-3 TRPM2 AIRE KRTAP10-5 TRPM2-AS LRRC3 KRTAP10-6 TSPEAR DNMT3L KRTAP10-2 TSPEAR-AS2 DNMT3L-AS1 LINC02575
          nsv509800 Chr.21:44284048 - 44471571 on Build GRCh38 Insertion CFAP410 PFKL LRRC3-DT TRPM2 AIRE TRPM2-AS LRRC3
          nsv6551108 Chr.21:44408128 - 44458436 on Build GRCh38 Duplication LRRC3-DT TRPM2 TRPM2-AS LRRC3
          nsv587740 Chr.21:44209682 - 44429981 on Build GRCh38 Loss CFAP410 DNMT3L PFKL DNMT3L-AS1 ICOSLG TRPM2 AIRE TRPM2-AS
          nsv587781 Chr.21:44344514 - 44447588 on Build GRCh38 Loss TRPM2 TRPM2-AS
          nsv6546352 Chr.21:44332501 - 44603700 on Build GRCh38 Deletion CFAP410 TSPEAR-AS1 KRTAP10-1 KRTAP10-4 LRRC3-DT KRTAP10-3 TRPM2 KRTAP10-5 TRPM2-AS LRRC3 KRTAP10-6 TSPEAR KRTAP10-2 TSPEAR-AS2 KRTAP10-7 LINC02575
          esv33817 Chr.21:43749531 - 44647625 on Build GRCh38 Loss KRTAP10-1 ICOSLG KRTAP10-4 KRTAP10-10 GATD3 TRPM2 AIRE TRPM2-AS KRTAP10-6 TSPEAR DNMT3L AGPAT3 KRTAP10-2 LINC01678 KRTAP10-8 CFAP410 KRTAP10-9 LOC105372832 PFKL TSPEAR-AS1 TRAPPC10 LRRC3-DT PWP2 KRTAP10-3 KRTAP10-5 PDXK LRRC3 RRP1 CSTB TSPEAR-AS2 KRTAP10-7 DNMT3L-AS1 KRTAP10-11 AATBC LINC02575
          nsv4283103 Chr.21:43950580 - 44658488 on Build GRCh38 Duplication KRTAP10-1 ICOSLG KRTAP10-4 KRTAP10-10 GATD3 TRPM2 AIRE TRPM2-AS KRTAP10-6 TSPEAR DNMT3L AGPAT3 KRTAP10-2 LINC01678 KRTAP12-3 KRTAP10-8 CFAP410 KRTAP10-9 LOC105372832 PFKL TSPEAR-AS1 TRAPPC10 LRRC3-DT PWP2 KRTAP10-3 KRTAP10-5 LRRC3 KRTAP12-4 TSPEAR-AS2 KRTAP10-7 DNMT3L-AS1 KRTAP10-11 LINC02575

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          More Information


          Set Membership:

          Intragenic Exonic Intronic Non-exonic DGV Variation

          Gene Ontology Categories:

          Function(s) Process(es)

          temperature homeostasis
          dendritic cell chemotaxis
          ion transport
          sodium ion transport
          calcium ion transport
          manganese ion transport
          response to heat
          response to purine-containing compound
          calcium-mediated signaling
          regulation of actin cytoskeleton organization
          response to hydroperoxide
          ion transmembrane transport
          sodium ion transmembrane transport
          release of sequestered calcium ion into cytosol
          protein homotetramerization
          regulation of filopodium assembly
          transmembrane transport
          cellular response to hydrogen peroxide
          calcium ion transmembrane transport
          cellular response to calcium ion
          manganese ion transmembrane transport
          cellular response to temperature stimulus
          zinc II ion transmembrane transport
          dendritic cell differentiation
          calcium ion transmembrane import into cytosol
          calcium ion import across plasma membrane
          ion channel activity
          cation channel activity
          calcium channel activity
          sodium channel activity
          manganese ion transmembrane transporter activity
          calcium ion binding
          calcium-release channel activity
          hydrolase activity
          metal ion binding
          metal ion transmembrane transporter activity
          ADP-ribose diphosphatase activity
          mono-ADP-D-ribose binding
          ligand-gated calcium channel activity

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