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Gene Symbol: SOD2
Assay Reference Genome Location: Chr.6:159683768 on build GRCh38
Cytoband

Assay ID

Hs04316215_cn

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Availability	Made To Order
Catalog #	4400291
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Genomic Map
Assay Details
More Information

Assay Details

Target Gene Details

Entrez Gene ID:	6648
Gene Name:	superoxide dismutase 2
Gene Aliases:	GC1, GClnc1, IPO-B, IPOB, MNSOD, MVCD6, Mn-SOD, lncRNA-GC1
Location:	Chr.6:159669069-159762281 on Build GRCh38
Assay Gene Location:	Within Intron 9

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SOD2	NM_000636.4			NP_000627.2
	NM_001024465.3			NP_001019636.1
	NM_001024466.3			NP_001019637.1
	NM_001322814.2			NP_001309743.1
	NM_001322815.2			NP_001309744.1
	NM_001322817.2			NP_001309746.1
	NM_001322819.2			NP_001309748.1
	NM_001322820.2			NP_001309749.1
	AK097395.1			BAG53464.1
	AK296809.1			BAG59382.1
	AK304766.1			BAG65521.1
	AK313082.1			BAG35908.1
	AY280718.1			AAP34407.1
	AY280719.1			AAP34408.1
	AY280720.1			AAP34409.1
	AY280721.1			AAP34410.1
	BC012423.1			AAH12423.1
	BM724413.1
	BM994509.1
	BT006967.1			AAP35613.1
	BU741675.1
	DQ003134.1			AAY21807.1
	GQ891541.1			ADO22403.1
	M36693.1			AAA36622.1
	X07834.1			CAA30687.1
	X14322.1			CAA32502.1
	X15132.1			CAA33228.1
	X59445.1			CAA42066.1
	Y00472.1			CAA68533.1
	Y00985.1			CAA68791.1

Target Copy Number Variation Details

DGV Version:

Release date: 2025-12-01, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv3207569	Chr.6:159639577 - 159693235 on Build GRCh38	Deletion	SOD2
esv2759483	Chr.6:159582799 - 159794119 on Build GRCh38	Gain	TCP1 SOD2-OT1 WTAP SOD2 SNORA20 SNORA29 ACAT2 MRPL18 LOC105378085
nsv6605539	Chr.6:159653701 - 159728800 on Build GRCh38	Duplication	WTAP SOD2

More Information

Set Membership:

Intragenic

Intronic

Non-exonic

DGV Variation

Gene Ontology Categories:

Function(s) Process(es)

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