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- SNP ID:
- rs2240822
- Gene
-
INMTINMT-FAM188B - Gene Name
- Set Membership:
- > HapMap
- Chromosome Location:
- Chr.7: 30752231 - 30752231 on Build GRCh38
- Polymorphism:
- C/T, Transition Substitution
- Context Sequence [VIC/FAM]:
ACTACTTGGCTACTTACTACAGCTT[C/T]GATGGCAGCCCCTCACCCGAGGCCG
Genomic Map
Back To TopAssay Details
Species: |
Human | ||||||||||||||||||||||||||||||||||||||||||||
dbSNP Submissions: |
NA
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Phenotype: |
MIM: 604854
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Literature Links: |
INMT PubMed Links | ||||||||||||||||||||||||||||||||||||||||||||
Allele Nomenclature: |
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Minor Allele Frequency: |
| 1000Genome | Applied Biosystems® | HapMap | ||||||
|---|---|---|---|---|---|---|---|---|
Global
|
Caucasian - Not Available | CEPH (CEU) - Not Available | ||||||
EAS
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African American - Not Available | YRI (Yoruba) - Not Available | ||||||
SAS
|
Chinese - Not Available | JPT (Japanese)
|
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AFR
|
Japanese - Not Available | CHB (Han Chinese)
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EUR
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AMR
|
| INMT - indolethylamine N-methyltransferase | ||||||
|---|---|---|---|---|---|---|
| Transcript Accession | SNP Location | SNP Type | Observed Codons | Observed Amino Acid | Protein ID | |
| NM_001199219.1 | 97 | Silent Mutation | TTC,TTT | F,F 27 | NP_001186148.1 | |
| NM_006774.4 | 97 | Silent Mutation | TTC,TTT | F,F 27 | NP_006765.4 | |
| INMT-FAM188B - INMT-FAM188B readthrough (NMD candidate) | ||||||
|---|---|---|---|---|---|---|
| There are no transcripts associated with this gene. | ||||||
Back To TopMore Information
Additional Information:
For this assay, SNP(s) [rs4723010] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
HapMap
|
Panther Classification:
Gene Ontology Categories:
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