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          • Home
          • › Search Tool
          • › Search Results
          • › Mm01187303_m1
          See other ATG5 GE Assays ›
          Gene Symbol:
          Atg5
          Gene Name:
          autophagy related 5
          Gene Aliases:
          2010107M05Rik, 3110067M24Rik, AW319544, Apg5l, Atg5l, C88337, Paddy
          Chromosome Location:
          Chr.10: 44268358 - 44364299 on Build GRCm38
          Species:
          Mouse
          Species Specific ID (Flybase ID):
          -
          Assay ID Mm01187303_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Atg5
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_053069.5 NP_444299.1 5 - 6 764 65
          GenBank mRNA AB048349.1 - 4 - 5 479 65
          AK028315.1 - 5 - 6 766 65
          AK207331.1 - 1 - 2 121 65
          BC002166.1 - 5 - 6 630 3486093 65

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          More Information


          Updated Mapping Information

          This assay targets the same location as MTA transcript cluster(s) TC1000000413.mm.1

          Set Membership:

          Ambion siRNA available Amplicon length less than or equal to 70 Apoptosis Mammalian Gene Collection Recommended Assay Mus musculus Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Atg5

          Panther Classification:

          Molecular Function -

          membrane trafficking regulatory protein

          Gene Ontology Categories:

          Function(s) Process(es)

          autophagosome assembly
          mitophagy
          blood vessel remodeling
          immune system process
          regulation of cytokine secretion involved in immune response
          C-terminal protein lipidation
          autophagy
          apoptotic process
          cellular response to nitrogen starvation
          response to fungus
          negative regulation of protein ubiquitination
          negative stranded viral RNA replication
          vasodilation
          response to drug
          negative regulation of apoptotic process
          post-translational protein modification
          nucleophagy
          innate immune response
          otolith development
          regulation of release of sequestered calcium ion into cytosol
          ventricular cardiac muscle cell development
          heart contraction
          positive regulation of mucus secretion
          regulation of cilium assembly
          positive regulation of mitophagy
          regulation of reactive oxygen species metabolic process
          negative regulation of reactive oxygen species metabolic process
          negative regulation of histone H4-K16 acetylation
          protein binding
          Atg8 ligase activity

          MicroArray Probes:

          Affymetrix

          Array Name Probe IDs Targets Target Type
          Affymetrix Mouse Clariom S Array PSR1000002818.mm.1 NM_053069.6 Refseq
          Affymetrix Mouse Clariom S Array PSR1000002818.mm.1 TC1000000413.mm.1 MTA TC

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