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          • Home
          • › Search Tool
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          • › Rn00562724_m1
          See other CASP1 GE Assays ›
          Gene Symbol:
          Casp1
          Gene Name:
          caspase 1
          Gene Aliases:
          Ice, Il1bc
          Chromosome Location:
          Chr.8: 2605743 - 2614637 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn00562724_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
          Your Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Casp1
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_012762.2 NP_036894.2 6 - 7 996 150
          GenBank mRNA D85899.1 - 6 - 7 996 150
          FQ228818.1 - 4 - 5 629 150
          S79676.1 - 2 - 3 339 150
          U14647.1 - 6 - 7 996 150

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC0800000012.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length greater than or equal to 101 Protease Recommended Assay Rattus norvegicus Rat Hypoxia Panel Rat Inflammation 1700 Inventoried Rat_Inflammation Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Casp1

          Panther Classification:

          Molecular Function -

          protease

          Gene Ontology Categories:

          Function(s) Process(es)

          response to hypoxia
          microglial cell activation
          proteolysis
          apoptotic process
          midgut development
          myoblast fusion
          memory
          response to bacterium
          response to toxic substance
          regulation of autophagy
          response to organic cyclic compound
          protein processing
          lung development
          response to lipopolysaccharide
          interleukin-1 beta production
          response to ATP
          response to drug
          regulation of apoptotic process
          positive regulation of apoptotic process
          positive regulation of I-kappaB kinase/NF-kappaB signaling
          positive regulation of circadian sleep/wake cycle, non-REM sleep
          positive regulation of cytokine secretion
          positive regulation of interleukin-1 alpha secretion
          positive regulation of interleukin-1 beta secretion
          regulation of inflammatory response
          mitochondrial depolarization
          membrane hyperpolarization
          pyroptosis
          cellular response to mechanical stimulus
          cellular response to organic substance
          execution phase of apoptosis
          programmed necrotic cell death
          toxin transport
          endopeptidase activity
          cysteine-type endopeptidase activity
          protein binding
          peptidase activity
          scaffold protein binding

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P468258 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 959546 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 611184 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 274734 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 127291 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 441419 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 279881 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 373604 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 283533 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 950150 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 337425 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 916759 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 375427 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 150998 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 6204 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 109765 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 35087 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 41575 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P468258 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P468258 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P468258 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P468258 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 37905 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 35430 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10907823 - -
          Affymetrix Rat Gene 1.0 ST Array 10907817 - -
          Affymetrix Rat Gene 1.0 ST Array 10907824 - -
          Affymetrix Rat Gene 1.0 ST Array 10907816 - -
          Affymetrix Rat Gene 1.0 ST Array 10907820 - -
          Affymetrix Rat Gene 1.0 ST Array 10907822 - -
          Affymetrix Rat Gene 1.0 ST Array 10907818 - -
          Affymetrix Rat Gene 1.0 ST Array 10907821 - -
          Affymetrix Rat Gene 1.0 ST Array 10907819 - -
          Affymetrix Rat Gene 1.1 ST Array 10907815 - -
          Rat Genome 230 2.0 Array 1369186_PM_at - -
          Rat Genome 230 2.0 Array 1369186_at - -
          Affymetrix HT Rat Focus Array 1369186_at - -
          Affymetrix HT Rat Focus Array 1369186_PM_at - -
          Affymetrix Rat Clariom S Assay PSR0800000058.rn.1 TC0800000012.rn.1 RTA TC
          Rat Expression Set 230 1369186_at - -
          Rat Expression Set 230 1369186_PM_at - -
          Affymetrix Rat Gene 1.0 ST Array 10907815 - -
          Rat Genome U34 Set U14647_g_at - -
          Rat Genome U34 Set S79676_s_at - -
          Rat Genome U34 Set U14647_at - -
          Rat Genome U34 Set U14647_g_at - -
          Rat Genome U34 Set U14647_at - -
          Rat Genome U34 Set S79676_s_at - -
          Rat Genome U34 Set U14647_at - -
          Rat Genome U34 Set U14647_g_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 22397264 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1361826 - -
          RatRef-12 Expression BeadChip ILMN_61763 - -

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