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- Gene Symbol:
-
Apaf1 - Gene Name:
- apoptotic peptidase activating factor 1
- Gene Aliases:
- -
- Chromosome Location:
- Chr.7: 31699311 - 31784192 on Build Rnor_6.0
- Species:
- Rat
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: Apaf1 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_023979.1 | NP_076469.1 | 22 - 23 | 3702 | 95 | |
| XM_008765263.1 | XP_008763485.1 | 19 - 20 | 3494 | 95 | ||
| GenBank mRNA | AF320222.1 | - | 22 - 23 | 3702 | 95 | |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as RTA transcript cluster(s) TC0700002457.rn.1Set Membership: |
Ambion siRNA available
Amplicon length between 86 and 100
Apoptosis
Recommended Assay
Rattus norvegicus
1700
Inventoried
Probe spans exons
|
Matching Ambion siRNAs:
Gene Ontology Categories:
Function(s)
Process(es)
response to hypoxia
neural tube closure
apoptotic process
activation of cysteine-type endopeptidase activity involved in apoptotic process
multicellular organism development
brain development
aging
response to nutrient
activation of cysteine-type endopeptidase activity involved in apoptotic process by cytochrome c
cardiac muscle cell apoptotic process
cell differentiation
forebrain development
glial cell apoptotic process
protein homooligomerization
neuron apoptotic process
cellular response to transforming growth factor beta stimulus
apoptotic signaling pathway
regulation of apoptotic DNA fragmentation
positive regulation of apoptotic signaling pathway
protein binding
ATP binding
cysteine-type endopeptidase activator activity involved in apoptotic process
heat shock protein binding
identical protein binding
ADP binding
response to hypoxia
neural tube closure
apoptotic process
activation of cysteine-type endopeptidase activity involved in apoptotic process
multicellular organism development
brain development
aging
response to nutrient
activation of cysteine-type endopeptidase activity involved in apoptotic process by cytochrome c
cardiac muscle cell apoptotic process
cell differentiation
forebrain development
glial cell apoptotic process
protein homooligomerization
neuron apoptotic process
cellular response to transforming growth factor beta stimulus
apoptotic signaling pathway
regulation of apoptotic DNA fragmentation
positive regulation of apoptotic signaling pathway
protein binding
ATP binding
cysteine-type endopeptidase activator activity involved in apoptotic process
heat shock protein binding
identical protein binding
ADP binding
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_64_P125033 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_43_P12379 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 601704 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 893016 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 491049 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 404516 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 563496 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 628726 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 572903 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 388819 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 217555 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 683385 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 569612 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 375237 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 40599 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 574510 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 201785 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 248897 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 364011 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 673476 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 75295 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 341469 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 286867 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 129017 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 433172 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 861856 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 322008 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 352920 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 407614 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 733815 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 970844 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 159219 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 238099 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 793730 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 913979 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 127651 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 218859 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 620021 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 955065 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 964424 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 219594 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 749404 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 128199 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 93357 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 446053 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 919154 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 24431 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 797092 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 941803 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 706024 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 162386 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 929965 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 881147 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 294925 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 504426 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 371518 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 435394 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 561397 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 931260 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 599497 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 536932 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 141067 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 157167 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 16520 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 18942 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 30730 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 52730 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 1842 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 50050 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 41566 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 165006 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_43_P12379 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P125033 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_43_P12379 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P125033 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_64_P125033 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_43_P12379 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_43_P12379 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 30 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 22071 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 27264 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 53572 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 31115 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 5127 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 83969 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 62060 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Rat Gene 1.0 ST Array | 10901803 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10901802 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10901809 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10901795 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10901804 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10901800 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10901784 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10901810 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10901805 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10901788 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10901794 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10901791 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10901789 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10901796 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10901808 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10901786 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10901799 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10901798 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10901787 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10901807 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10901797 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10901785 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10901793 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10901801 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10901792 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10901806 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10901783 | - | - |
| Rat Genome 230 2.0 Array | 1369197_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1369197_at | - | - |
| Rat Genome 230 2.0 Array | 1369198_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1369198_at | - | - |
| Affymetrix HT Rat Focus Array | 1369198_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1369197_at | - | - |
| Affymetrix HT Rat Focus Array | 1369198_at | - | - |
| Affymetrix HT Rat Focus Array | 1369197_PM_at | - | - |
| Affymetrix Rat Clariom S Assay | PSR0700019630.rn.1 | TC0700002457.rn.1 | RTA TC |
| Rat Expression Set 230 | 1369197_PM_at | - | - |
| Rat Expression Set 230 | 1369198_at | - | - |
| Rat Expression Set 230 | 1369198_PM_at | - | - |
| Rat Expression Set 230 | 1369197_at | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10901783 | - | - |
| Rat Genome U34 Set | rc_AI059814_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Rat Genome Survey Microarray | 21567957 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina ratRef-12 v1.0 expression beadchip | ILMN_1375211 | - | - |
| RatRef-12 Expression BeadChip | ILMN_59152 | - | - |
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