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          • Home
          • › Search Tool
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          • › Rn01460662_m1
          See other NR1D1 GE Assays ›
          Gene Symbol:
          Nr1d1
          Gene Name:
          nuclear receptor subfamily 1, group D, member 1
          Gene Aliases:
          REV-ERBAALPHA
          Chromosome Location:
          Chr.10: 86683875 - 86690815 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn01460662_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price 284.00
          Your Price
          Online offer: 266.65
          266.65
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Nr1d1
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_001113422.1 NP_001106893.1 7 - 8 1852 64
          NM_145775.2 NP_665718.2 7 - 8 1822 64
          GenBank mRNA BC062047.1 - 7 - 8 1852 5598020 64

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC1000003722.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length less than or equal to 70 Nuclear Receptor 3' Most Mammalian Gene Collection Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Nr1d1

          Panther Classification:

          Molecular Function -

          C4 zinc finger nuclear receptor DNA-binding transcription factor zinc finger transcription factor gene-specific transcriptional regulator

          Gene Ontology Categories:

          Function(s) Process(es)

          negative regulation of transcription from RNA polymerase II promoter
          glycogen biosynthetic process
          transcription, DNA-templated
          regulation of transcription, DNA-templated
          circadian rhythm
          proteasomal protein catabolic process
          negative regulation of receptor biosynthetic process
          regulation of lipid metabolic process
          cell differentiation
          circadian regulation of gene expression
          negative regulation of toll-like receptor 4 signaling pathway
          regulation of gluconeogenesis by regulation of transcription from RNA polymerase II promoter
          regulation of circadian rhythm
          steroid hormone mediated signaling pathway
          response to leptin
          regulation of fat cell differentiation
          negative regulation of transcription, DNA-templated
          positive regulation of transcription, DNA-templated
          circadian temperature homeostasis
          regulation of insulin secretion involved in cellular response to glucose stimulus
          regulation of type B pancreatic cell proliferation
          positive regulation of bile acid biosynthetic process
          cellular response to lipopolysaccharide
          regulation of cholesterol homeostasis
          positive regulation of cholesterol homeostasis
          RNA polymerase II regulatory region sequence-specific DNA binding
          RNA polymerase II core promoter proximal region sequence-specific DNA binding
          core promoter sequence-specific DNA binding
          transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding
          transcription corepressor binding
          DNA binding
          transcription factor activity, sequence-specific DNA binding
          steroid hormone receptor activity
          protein binding
          zinc ion binding
          heme binding
          transcription regulatory region DNA binding

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P175041 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 281716 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 634118 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 385279 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 34988 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 104406 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 130814 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P175041 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P175041 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P175041 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P175041 - -
          Matsumoto (Agilent Rat cDNA Microarray G4105A) 702153441 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 50191 - -
          Agilent Rat cDNA Microarray (G4105A) 702153441 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10746959 - -
          Affymetrix Rat Gene 1.0 ST Array 10746957 - -
          Affymetrix Rat Gene 1.0 ST Array 10746965 - -
          Affymetrix Rat Gene 1.0 ST Array 10746963 - -
          Affymetrix Rat Gene 1.0 ST Array 10746967 - -
          Affymetrix Rat Gene 1.0 ST Array 10746964 - -
          Affymetrix Rat Gene 1.0 ST Array 10746956 - -
          Affymetrix Rat Gene 1.0 ST Array 10746962 - -
          Affymetrix Rat Gene 1.0 ST Array 10746960 - -
          Affymetrix Rat Gene 1.0 ST Array 10746961 - -
          Affymetrix Rat Gene 1.0 ST Array 10746958 - -
          Affymetrix Rat Gene 1.0 ST Array 10746966 - -
          Affymetrix Rat Gene 1.1 ST Array 10746955 - -
          Affymetrix Rat Gene 1.1 ST Array 10738056 - -
          Rat Genome 230 2.0 Array 1370816_at - -
          Rat Genome 230 2.0 Array 1370816_PM_at - -
          Affymetrix HT Rat Focus Array 1370816_at - -
          Affymetrix HT Rat Focus Array 1370816_PM_at - -
          Affymetrix Rat Clariom S Assay PSR1000033295.rn.1 TC1000003722.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR1000033294.rn.1 TC1000003722.rn.1 RTA TC
          Rat Expression Set 230 1370816_at - -
          Rat Expression Set 230 1370816_PM_at - -
          Affymetrix Rat Gene 1.0 ST Array 10746955 - -
          Rat Genome U34 Set M25804_at - -
          Rat Genome U34 Set M25804_g_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 21557648 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1363753 - -
          RatRef-12 Expression BeadChip ILMN_58528 - -

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