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          • Home
          • › Search Tool
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          • › Rn03810376_m1
          See other IHH GE Assays ›
          Gene Symbol:
          Ihh
          Gene Name:
          Indian hedgehog
          Gene Aliases:
          -
          Chromosome Location:
          Chr.9: 82208223 - 82214440 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn03810376_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price 284.00
          Your Price
          Online offer: 266.65
          266.65
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Ihh
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_053384.1 NP_445836.1 2 - 3 807 66
          GenBank mRNA AF162914.1 - 1 - 2 276 66

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC0900002256.rn.1

          Set Membership:

          Amplicon length less than or equal to 70 Protease 3' Most Recommended Assay Rattus norvegicus Inventoried Probe spans exons

          Gene Ontology Categories:

          Function(s) Process(es)

          skeletal system development
          ossification
          patterning of blood vessels
          osteoblast differentiation
          in utero embryonic development
          cell fate specification
          morphogenesis of a branching structure
          vasculature development
          heart looping
          positive regulation of mesenchymal cell proliferation
          epithelial cell morphogenesis
          retinal pigment epithelium development
          proteoglycan metabolic process
          proteolysis
          smoothened signaling pathway
          cell-cell signaling
          pattern specification process
          positive regulation of cell proliferation
          embryonic pattern specification
          negative regulation of signal transduction
          intein-mediated protein splicing
          cell differentiation
          vitelline membrane formation
          pancreas development
          positive regulation of chondrocyte differentiation
          response to estradiol
          positive regulation of collagen biosynthetic process
          negative regulation of T cell differentiation in thymus
          negative regulation of immature T cell proliferation in thymus
          positive regulation of T cell differentiation in thymus
          multicellular organism growth
          chondrocyte proliferation
          regulation of growth
          embryonic digit morphogenesis
          camera-type eye development
          negative regulation of apoptotic process
          bone resorption
          regulation of cell differentiation
          negative regulation of cell differentiation
          positive regulation of smoothened signaling pathway
          positive regulation of transcription from RNA polymerase II promoter
          positive regulation of alpha-beta T cell differentiation
          negative regulation of alpha-beta T cell differentiation
          negative regulation of eye pigmentation
          cell maturation
          embryonic digestive tract morphogenesis
          embryonic camera-type eye morphogenesis
          neuron development
          smooth muscle tissue development
          positive regulation of epithelial cell proliferation
          cartilage development
          maternal process involved in female pregnancy
          camera-type eye photoreceptor cell fate commitment
          head morphogenesis
          somite development
          embryonic skeletal joint development
          epithelial cell-cell adhesion
          molecular_function
          patched binding
          calcium ion binding
          peptidase activity

          MicroArray Probes:

          Agilent Affymetrix Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_43_P15154 - -
          Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P065081 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 856573 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 387912 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 55086 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_43_P15154 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P065081 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_43_P15154 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P065081 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P065081 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_43_P15154 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_43_P15154 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P638654 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_42_P666128 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P306554 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10929030 - -
          Affymetrix Rat Gene 1.0 ST Array 10929029 - -
          Affymetrix Rat Gene 1.0 ST Array 10929028 - -
          Affymetrix Rat Gene 1.1 ST Array 10929027 - -
          Rat Genome 230 2.0 Array 1393271_at - -
          Rat Genome 230 2.0 Array 1393271_PM_at - -
          Affymetrix Rat Clariom S Assay PSR0900018377.rn.1 TC0900002256.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0900018376.rn.1 TC0900002256.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0900018375.rn.1 TC0900002256.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0900018372.rn.1 TC0900002256.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0900018373.rn.1 TC0900002256.rn.1 RTA TC
          Rat Expression Set 230 1393271_at - -
          Rat Expression Set 230 1393271_PM_at - -
          Affymetrix Rat Gene 1.0 ST Array 10929027 - -
          Rat Genome U34 Set rc_AA955211_r_at - -
          Rat Genome U34 Set rc_AA955211_i_at - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1376776 - -
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1375526 - -

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