How to Use the Arithmetic Module
How-to

How to Use the Arithmetic Module

Demo

2 Jan 2024 - This series of video tutorials introduces the Arithmetic module and examples of use cases.  Learn more

Python Command Module
Add-on

Python Command Module

Python (pyscro)

6 Mar 2023 - A module to enter and execute Python code from Amira-Avizo Software interface.  Learn more

AI Assisted Tool for CryoEM Segmentation
How-to

AI Assisted Tool for CryoEM Segmentation

Demo, Data

28 Nov 2022 - Here we provide a tutorial to interactively segment a cellular cryo-electron tomography image using the AI assisted segmentation tool of the Segmentation+ workroom.  Learn more

Xtras Installer for Amira-Avizo 2023.1 and Prior
Add-on

Xtras Installer for Amira-Avizo 2023.1 and Prior

Recipe (hxrecipe), Recipe ISP, IVP, A2D, Deep learning model, Python (pyscro), Tcl, XPand module, Project (hx, pgo), Template, Demo, Data, Misc

30 Jun 2022 - The Xtras Installer is a tool that provides an easy way to install resources from the Xtra Library on to your local machine.  Learn more

Object Separation using Random-Walk Distance Map
Add-on

Object Separation using Random-Walk Distance Map

Recipe ISP, IVP, A2D, Demo, Data

3 Jun 2022 - Recipe utilizing an object separation workflow relying on the Random-Walk Distance Map. It is more robust than Separate Object for noisy segmentation or non-spherical shapes.  Learn more

Bone Segmentation Workflow for Murine Hindpaw
Add-on How-to

Bone Segmentation Workflow for Murine Hindpaw

Recipe ISP, IVP, A2D, Demo, Data

28 Apr 2022 - Semi-automatic workflow and recipe for high-throughput bone segmentation of murine hindpaw micro-CT datasets.  Learn more

Automatic Extraction of Transparent Surface Cross Section
Add-on How-to

Automatic Extraction of Transparent Surface Cross Section

Python (pyscro), Project (hx, pgo)

20 Oct 2020 - A module for creating partially transparent capping surfaces.  Learn more

Hough Circle Fitting
Add-on

Hough Circle Fitting

Python (pyscro)

30 Jul 2020 - This module uses a Generalized Hough-transform to detect circles in an image.  Learn more