New
Getting Started with Amira-Avizo Software
Demo
8 Jul 2026 - Two videos introducing the layout and basic interactivity within Thermo Scientific Amira-Avizo Software. Learn more
New
How to Visualize 3D Image Data
Demo
8 Jul 2026 - Amira and Avizo provide several ways to view 3D image data. This video explains how to view 3D image data as a series of 2D Ortho Slices, as an Isosurface, and as a direct 3D Volume Rendering. Learn more
New
How to Load 3D Image Data into Amira-Avizo Software
Demo
8 Jul 2026 - Nearly all Amira-Avizo projects begin by loading image data. This brief tutorial explains how to load 2D and 3D image data from disk. Learn more
New
How to Save an Amira-Avizo Project
Demo
8 Jul 2026 - It is important to save and share work done in Amira-Avizo Software. Project files are used to restore a prior session. This video explains how to save your entire project, including considerations for disk space, recomputation, and portability. Learn more
New
How to Automate Routines with Recipes
Demo
8 Jul 2026 - Routine image processing and analysis steps can be automated using the flexible Recipes concept in Amira-Avizo Software. These videos explain how to create, modify, and reuse Recipes. Advanced topics are covered. Learn more
New
Introduction to the Segmentation+ Workroom Interface
Demo
8 Jul 2026 - Many segmentation projects benefit from a specialist's manual selections. This short tutorial explains the interface used for manual segmentation in Amira and Avizo Software. Learn more
New
How to Use Interactive Segmentation Tools in Segmentation+ Workroom
Demo
8 Jul 2026 - These two tutorials list the most commonly used segmentation tools in Amira and Avizo Software. The combination of tools provides excellent flexibility for full segmentation projects or for establishing ground truth used in Deep Learning model training. Learn more
New
How to Make Animations with the Animation Director
Demo
8 Jul 2026 - Animations are a highly compelling tool for disseminating the research you do with Amira-Avizo Software and your associated imaging tools. These videos explain how to use the Animation Director for flexible and high-quality animation production. Learn more
New
How to Animate Appearance and Disappearance
Demo
8 Jul 2026 - This video explains a basic way to animate the appearance and disappearance of displays in Amira-Avizo Software. Learn more
New
How to Use Volume Edit for Custom ROI Selection and Cropping
Demo
8 Jul 2026 - This tutorial explores the Volume Edit module: a versatile way of modifying a dataset to remove sample holders or irrelevant objects before visualization and segmentation. Learn more
New
How to Manage Multi-Channel Data
Demo
8 Jul 2026 - Often, optical and spectroscopy data are stored as independent channels - each containing unique information as image fields. This tutorial explains how to relate 2 or more datasets in Amira-Avizo Software using the Multi-channel Field object. Learn more
New
Amira-Avizo eLearning datasets: Image Segmentation
Data
24 May 2026 - This repository contains all the practice datasets within the Image Segmentation eLearning lessons. Learn more
Segmentation+ Workroom Tutorial
Demo
2 May 2024 - Discover the Segmentation+ workroom, a powerful tool for interactive 3D image segmentation. This tutorial offers a comprehensive overview of the segmentation process, covering essential principles and tools. Learn more
How to Use the Arithmetic Module
Demo
2 Jan 2024 - This series of video tutorials introduces the Arithmetic module and examples of use cases. Learn more
Trabecular Segmentation Workflow for Murine Tibial Bone
Recipe (hxrecipe), Project (hx, pgo), Demo, Data
11 Dec 2023 - Here we provide a workflow to easily obtain the segmentation of trabecular bones. Learn more
Visualize Identified Molecules of a Cryo-Tomogram
Python (pyscro), Project (hx, pgo)
4 Dec 2023 - This Xtra provides the means to import results from template matching and visualize them with the Molecule Cloud View module. In addition, a module is provided to crop point clouds according to an ROI-box. Learn more
AI Assisted Tool for CryoEM Segmentation
Demo, Data
28 Nov 2022 - Here we provide a tutorial to interactively segment a cellular cryo-electron tomography image using the AI assisted segmentation tool of the Segmentation+ workroom. Learn more
Divide Full Data Volume into Defined Sub-Volume Blocks for Label Analysis
Recipe (hxrecipe), Project (hx, pgo), Demo
1 Sep 2022 - This Xtra demonstrates how to use the Arithmetic module to divide a whole volume data into defined sub-volume blocks and then perform label analysis on the blocks. Learn more
How to Install the Deep Learning Python Environment
Python (pyscro), Demo, Misc
29 Jul 2022 - Two videos explain how to install the dependencies needed to use Deep Learning within Amira 3D, Avizo 3D, or Pergeos. One covers the standard install and the other is for users without an internet connection. Learn more
How to Calculate Surface Area of a Custom ROI
Demo, Data
29 Jul 2022 - This tutorial elaborates how to draw a region of interest on a surface. With this ROI, you can calculate its surface area. Learn more