Efficient Graph-based 2D Image Segmentation
XPand module
12 Feb 2021 - This Xtra implements efficient graph-based image segmentation by Felzenszwalb and Huttenlocher. Learn more
Bone Segmentation Workflow for Murine Hindpaw
Recipe ISP, IVP, A2D, Demo, Data
28 Apr 2022 - Semi-automatic workflow and recipe for high-throughput bone segmentation of murine hindpaw micro-CT datasets. Learn more
Deep learning model, Python (pyscro), Project (hx, pgo)
23 Oct 2025 - Use pre-trained CellPose models for prediction of instance-level segmentation and labeling in both 2D and 3D data, applicable to a variety of generalized objects. Learn more
Python (pyscro)
26 Nov 2025 - This module generates the 3D convex hull of a volume from a binary label image. Learn more
New
How to Use Interactive Segmentation Tools in Segmentation+ Workroom
Demo
8 Jul 2026 - These two tutorials list the most commonly used segmentation tools in Amira and Avizo Software. The combination of tools provides excellent flexibility for full segmentation projects or for establishing ground truth used in Deep Learning model training. Learn more
New
Introduction to the Segmentation+ Workroom Interface
Demo
8 Jul 2026 - Many segmentation projects benefit from a specialist's manual selections. This short tutorial explains the interface used for manual segmentation in Amira and Avizo Software. Learn more