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          • Home
          • › Search Tool
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          • › Hs00483111_cn
          See other GAPDH CNV Assays ›
          Gene Symbol
          GAPDH
          Assay Reference Genome
          Location

          Chr.12:6537223 on build GRCh38
          Cytoband
          Assay ID Hs00483111_cn
          Size
          Availability Made To Order
          Catalog # 4400291
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Target Gene Details

          Entrez Gene ID:

          2597

          Gene Name:

          glyceraldehyde-3-phosphate dehydrogenase

          Gene Aliases:

          G3PD, GAPD, HEL-S-162eP

          Location:

          Chr.12:6534517-6538371 on Build GRCh38

          Assay Gene Location:

          Overlaps Exon 6 - Intron 6
          Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
          GAPDH NM_001256799.3 NP_001243728.1
          NM_001289745.3 NP_001276674.1
          NM_001289746.2 NP_001276675.1
          NM_001357943.2 NP_001344872.1
          NM_002046.7 NP_002037.2
          NR_152150.2
          AB062273.1 BAB93466.1
          AF261085.1 AAF99678.1
          AK026525.1
          AK299448.1 BAG61421.1
          AK308198.1
          AY007133.1 AAG01996.1
          AY633612.1 AAV33305.1
          BC001601.1 AAH01601.1
          BC004109.2 AAH04109.1
          BC009081.1 AAH09081.1
          BC013310.2 AAH13310.1
          BC023632.2 AAH23632.1
          BC025925.1 AAH25925.1
          BC026907.1 AAH26907.1
          BC029618.1 AAH29618.1
          BC083511.1 AAH83511.1
          BG724119.1
          BI463134.1
          BM763361.1
          BT006893.1 AAP35539.1
          BU155402.1
          CR407671.1 CAG28599.1
          DQ403057.1 ABD77190.1
          EF036498.1 ABO65084.1
          EU668321.1 ACF94474.1
          J02642.1 AAA52496.1
          M17851.1 AAA86283.1
          M33197.1 AAA52518.1
          OP866994.1
          X01677.1 CAA25833.1
          X53778.1 CAA37794.1

          Target Copy Number Variation Details

          DGV Version:

          Release date: 2025-12-01, GRCh GRCh38
          Target
          Variation
          Location CNV
          Subtype
          Genes
          dgv1357n223 Chr.12:6012501 - 7083700 on Build GRCh38 Duplication LAG3 GAPDH P3H3 SCARNA10 PTMS SNORA120 PLEKHG6 MRPL51 C1S PHB2 C12orf57 TNFRSF1A CD4 CD27-AS1 NCAPD2 NOP2 SCARNA11 RNU7-1 TAPBPL TPI1 COPS7A VWF SCARNA12 CD9 LTBR EMG1 SCNN1A CD27 ACRBP USP5 SPSB2 CDCA3 ATN1 VAMP1 CHD4-AS1 ING4 MLF2 GPR162 ENO2 IFFO1 MIR200C PTPN6 MIR141 CHD4 LRRC23 LPCAT3 C1R GNB3 DSTNP2 LPAR5 LOC105369632 MIR200CHG PIANP RPL13P5 ZNF384
          esv3628408 Chr.12:6537046 - 6544615 on Build GRCh38 Gain GAPDH IFFO1
          nsv8896 Chr.12:6536085 - 6538081 on Build GRCh38 Gain GAPDH
          nsv557255 Chr.12:6531324 - 6538371 on Build GRCh38 Loss GAPDH NCAPD2
          nsv475237 Chr.12:6537270 - 6537270 on Build GRCh38 Novel Sequence Insertion GAPDH
          esv2759876 Chr.12:6344718 - 6554669 on Build GRCh38 Gain VAMP1 TAPBPL GAPDH CD27 MRPL51 IFFO1 CD27-AS1 NCAPD2 SCARNA10 LTBR SCNN1A
          nsv4205161 Chr.12:6355193 - 6537193 on Build GRCh38 Duplication VAMP1 TAPBPL GAPDH CD27 MRPL51 CD27-AS1 NCAPD2 SCARNA10 LTBR SCNN1A
          nsv983266 Chr.12:6536306 - 6538095 on Build GRCh38 Duplication GAPDH
          nsv5914213 Chr.12:6537213 - 6537304 on Build GRCh38 Deletion GAPDH

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          More Information


          Set Membership:

          Intragenic Non-exonic DGV Variation

          Gene Ontology Categories:

          Function(s) Process(es)

          microtubule cytoskeleton organization
          positive regulation of cytokine production
          immune system process
          glucose metabolic process
          glycolytic process
          regulation of translation
          apoptotic process
          negative regulation of endopeptidase activity
          regulation of macroautophagy
          negative regulation of translation
          killing of cells of other organism
          positive regulation of type I interferon production
          peptidyl-cysteine S-trans-nitrosylation
          positive regulation of I-kappaB kinase/NF-kappaB signaling
          innate immune response
          protein stabilization
          defense response to fungus
          neuron apoptotic process
          killing by host of symbiont cells
          antimicrobial humoral immune response mediated by antimicrobial peptide
          cellular response to interferon-gamma
          glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
          protein binding
          microtubule binding
          oxidoreductase activity
          oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
          transferase activity
          aspartic-type endopeptidase inhibitor activity
          peptidyl-cysteine S-nitrosylase activity
          identical protein binding
          NADP binding
          NAD binding
          disordered domain specific binding

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