Name: [Hs00855195_cn] [PICALM]
Creator: Thermo Fisher Scientific
Keywords: [PICALM] Assay, [phosphatidylinositol binding clathrin assembly protein] Assay

Genomic Map

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Assay Details

Target Gene Details

Entrez Gene ID:	8301
Gene Name:	phosphatidylinositol binding clathrin assembly protein
Gene Aliases:	CALM, CLTH, LAP
Location:	Chr.11:85957175-86069860 on Build GRCh38
Assay Gene Location:	Within Exon 23

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PICALM	NM_001008660.3	20	2480	NP_001008660.1
	NM_001206946.2	20	2585	NP_001193875.1
	NM_001206947.2	19	2163	NP_001193876.1
	NM_001411034.1	19	2546	NP_001397963.1
	NM_007166.4	20	2606	NP_009097.2
	XM_005274322.4	22	2733	XP_005274379.1
	XM_005274326.4	21	2630	XP_005274383.1
	XM_005274328.4	21	2615	XP_005274385.1
	XM_005274329.5	20	2591	XP_005274386.1
	XM_005274334.4	19	2531	XP_005274391.1
	XM_005274336.4	20	2465	XP_005274393.1
	XM_005274337.4	18	2441	XP_005274394.1
	XM_005274340.4	17	2291	XP_005274397.1
	XM_017018381.3	21	2594	XP_016873870.1
	XM_017018383.3	19	2456	XP_016873872.1
	XM_017018384.3	19	2441	XP_016873873.1
	XM_017018385.3	18	2426	XP_016873874.1
	XM_017018386.3	18	2396	XP_016873875.1
	XM_017018387.3	18	2381	XP_016873876.1
	XM_017018388.3	19	2372	XP_016873877.1
	XM_024448700.2	21	2609	XP_024304468.1
	XM_047427659.1	20	2570	XP_047283615.1
	XM_047427660.1	22	2440	XP_047283616.1
	XM_047427661.1	19	2525	XP_047283617.1
	XM_047427662.1	19	2510	XP_047283618.1
	XM_047427663.1	18	2420	XP_047283619.1
	XM_047427665.1	18	2348	XP_047283621.1
	XM_047427666.1	19	2148	XP_047283622.1
	XM_047427667.1	17	2288	XP_047283623.1
	XM_047427668.1	17	2276	XP_047283624.1
	XM_047427669.1	16	2183	XP_047283625.1
	AB210017.1	20	2598	BAE06099.2
	AK128786.1	1	347
	AK291414.1	21	2486	BAF84103.1
	AK297062.1	12	1363	BAG59583.1
	BC048259.1	20	2380	AAH48259.2
	BC064357.1	20	2455	AAH64357.1
	BC073961.1	20	2329	AAH73961.1

Target Copy Number Variation Details

DGV Version:

Release date: 2025-12-01, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv6458226	Chr.11:85929192 - 85974323 on Build GRCh38	Duplication	PICALM
nsv1035489	Chr.11:85791910 - 86067187 on Build GRCh38	Gain	CCDC83 PICALM SYTL2
nsv1053808	Chr.11:85877876 - 86046651 on Build GRCh38	Gain	CCDC83 PICALM
dgv1247n100	Chr.11:85930576 - 85973892 on Build GRCh38	Gain	PICALM
nsv5920899	Chr.11:85426274 - 86526514 on Build GRCh38	Deletion	CCDC81 CCDC89 TMEM126B TMEM126A PICALM MIR6755 CREBZF ME3 CCDC83 LOC100289518 SYTL2 DLG2 HIKESHI EED
nsv6475333	Chr.11:85864472 - 86045913 on Build GRCh38	Duplication	CCDC83 PICALM