Name: [465207_mat] []
Creator: Thermo Fisher Scientific
Keywords: [] Assay, [] Assay

Genomic Map

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Assay Details

MIPF0000081, MIR168

CCCGCCUUGCAUCAACUGAAU

Arabidopsis lyrata: aly-miR168a* (v18)
Medicago truncatula: mtr-miR168c* (v18)

Assay Name:	aly-miR168a*
miRBase Accession Number:	MI0000210
miRBase Version:	v22.1
Chromosome Location:	Chr.4: 10578635 - 10578772 [+] on Build TAIR10.1
Mature miRNA Sequence:	CCCGCCUUGCAUCAACUGAAU
Species:	Arabidopsis, Arabidopsis lyrata, Brassica rapa, Camelina sativa, Citrus sinensis, Fragaria vesca, Medicago truncatula, Populus trichocarpa, Solanum lycopersicum
Product Type:	TaqMan^™ MicroRNA Assay

Stem-loop ID	ath-MIR168a
Stem-loop Accession #	MI0000210
Stem-loop Sequence	CACCAUCGGGCUCGGAUUCGCUUGGUGCAGGUCGGGAACCAAUUCGGCUGACACAGCCUCGUGACUUUUAAACCUUUAUUGGUUUGUGAGCAGGGAUUGGAUCCCGCCUUGCAUCAACUGAAUCGGAUCCUCGAGGUG
Chromosome Location	Chr. 4 - 10578635 - 10578772 [+] on Build TAIR10.1
Mature MicroRNA	miRBase Accession #: MIMAT0031884 miRBase ID: ath-miR168a-3p Mature miRNA Sequence: CCCGCCUUGCAUCAACUGAAU Chromosome Location: Chr. 4 - 10578635 - 10578772 [+] on Build TAIR10.1

Stem-loop ID	aly-MIR168a
Stem-loop Accession #	MI0014543
Stem-loop Sequence	GAGUCUCACCGUCGGGCUCGGAUUCGCUUGGUGCAGGUCGGGAACCAAUUCGGCUGACACAGCCUCGUGACUUUAAAACCUUUAUUGGUUUGUGAGCAGGGAUUGGAUCCCGCCUUGCAUCAACUGAAUCGGAUCCCCGAGGUGUAAGAAAACUC
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0017482 miRBase ID: aly-miR168a-3p Mature miRNA Sequence: CCCGCCUUGCAUCAACUGAAU Chromosome Location: NA

Stem-loop ID	bra-MIR168b
Stem-loop Accession #	MI0030555
Stem-loop Sequence	CGGGCUCGGAUUCGCUUGGUGCAGGUCGGGACUAAUUCGCUGACACAGCCACGUGGAUUUUCCUUAUUGGUUUGUGAGCAGGGAUUGGAUCCCGCCUUGCAUCAACUGAAUCGGAGCCUCGAUGGUG
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0035833 miRBase ID: bra-miR168b-3p Mature miRNA Sequence: CCCGCCUUGCAUCAACUGAAU Chromosome Location: NA

Stem-loop ID	bra-MIR168c
Stem-loop Accession #	MI0030556
Stem-loop Sequence	GAAUCACCGUCGGGCUCGGAUUCGCUUGGUGCAGGUCGGGACACAAAUCACUGGUGCUUUUGCCUUAUUGGUUUGUGAGCAGGGAUUGGCUCCCGCCUUGCAUCAACUGAAUCGGAGCCUCCAAUGGUGAAAC
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0035835 miRBase ID: bra-miR168c-3p Mature miRNA Sequence: CCCGCCUUGCAUCAACUGAAU Chromosome Location: NA

Stem-loop ID	csi-MIR168
Stem-loop Accession #	MI0039699
Stem-loop Sequence	GUUACCGGCGGUCUCUAAUUCGCUUGGUGCAGGUCGGGAACUGAUUGGCUAGUUUUUUUUUUGAAAUUUUUUGACAGCGAGGUGGCGUGUUGUAAUUGGUCGUAACGUUUAAAUUAAUGAUUGAAAAAAUGCGAAUUGGAUCCCGCCUUGCAUCAACUGAAUCGGAGACCGAGGUGA
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0048986 miRBase ID: csi-miR168-3p Mature miRNA Sequence: CCCGCCUUGCAUCAACUGAAU Chromosome Location: NA

Stem-loop ID	fve-MIR168
Stem-loop Accession #	MI0036379
Stem-loop Sequence	AGUAGUUACUGGCGGGUCUCUAAUUCGCUUGGUGCAGGUCGGGAACUGCUUCGGUUUUAGAGAGAGAGCCAGAUGGCUGCGGUUCCAGCGGAGCGGGUCCCGCCUUGCAUCAACUGAAUCGGAGACCGCGGUGAAAUCU
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0044511 miRBase ID: fve-miR168-3p Mature miRNA Sequence: CCCGCCUUGCAUCAACUGAAU Chromosome Location: NA

Stem-loop ID	mtr-MIR168c
Stem-loop Accession #	MI0019093
Stem-loop Sequence	CUCACUUCGCGGUCUCUAAUUCGCUUGGUGCAGGUCGGGAACCACUACAUCCGCUGUUUUCGUAGAAACCGGCGGUGAAUUGGAUCCCGCCUUGCAUCAACUGAAUCGGAGGCCGCGGUGAAUCUA
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0022236 miRBase ID: mtr-miR168c-3p Mature miRNA Sequence: CCCGCCUUGCAUCAACUGAAU Chromosome Location: NA

Stem-loop ID	ptc-MIR168a
Stem-loop Accession #	MI0002243
Stem-loop Sequence	GGUCUCUGAUUCGCUUGGUGCAGGUCGGGAACUGAUUCGGCGAUUUGAUUGCCAGAUGGCUCGACAUGACUGGUUGUUGUGGAAAAAGAAAAGGAAGGAAACAGGAAAAAAAACAAAGAAUAGCGAAUUGGAUCCCGCCUUGCAUCAACUGAAUCGGAGG
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0022896 miRBase ID: ptc-miR168a-3p Mature miRNA Sequence: CCCGCCUUGCAUCAACUGAAU Chromosome Location: NA

Stem-loop ID	ptc-MIR168b
Stem-loop Accession #	MI0002244
Stem-loop Sequence	GGUCUCUAAUUCGCUUGGUGCAGGUCGGGAACUGAUUCGGCGAUUUGAUUGCCAGAUGGCUAAACACGAUUGGCUGUGAGGCAAAUUAUAAAAAGAAAGAGAAUUGGAUCCCGCCUUGCAUCAACUGAAUCGGAGA
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0022897 miRBase ID: ptc-miR168b-3p Mature miRNA Sequence: CCCGCCUUGCAUCAACUGAAU Chromosome Location: NA

Stem-loop ID	sly-MIR168b
Stem-loop Accession #	MI0024353
Stem-loop Sequence	UUGCGGUGGUUUCUCAUUCGCUUGGUGCAGGUCGGGACCUACCUCGCCGGCAACAAUGGCGGUAGCUGACGGCGACGGCAGCGUACCGGUAAAAAAGAAUCUUAUUUUUACAUGUUGUUGCGUAGUUUGGGUCCCGCCUUGCAUCAACUGAAUAGGAGACUGCGGUGA
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0031132 miRBase ID: sly-miR168b-3p Mature miRNA Sequence: CCCGCCUUGCAUCAACUGAAU Chromosome Location: NA