Porosity and Permeability by blocks
Add-on

Porosity and Permeability by blocks

Tcl

3 Jul 2020 - Splits a binary pore space into blocks and output one porosity and permeability value for every block  Learn more

Extract Label
Add-on

Extract Label

Python (pyscro)

11 May 2020 - This module extracts a specified label region by its ID.  Learn more

Scale-Space Laplacian of Gaussian Filter
Add-on

Scale-Space Laplacian of Gaussian Filter

Python (pyscro)

15 Apr 2020 - Image processing filter enhancing spherical or blob like objects of various sizes.  Learn more

Load a Numpy array into PerGeos-Amira-Avizo using the Python API
Add-on

Load a Numpy array into PerGeos-Amira-Avizo using the Python API

Python (pyscro)

21 Oct 2019 - This script simply reads and loads numpy arrays in a user specified directory into PerGeos/Amira-Avizo as an image.  Learn more

Random Forests for Multiclass Segmentation using Python API in PerGeos
Add-on

Random Forests for Multiclass Segmentation using Python API in PerGeos

Python (pyscro), Project (hx, pgo), Data

21 Oct 2019 - Simple demonstration of feature computation where the feature vector contains intensity and 2D eigenvalues (X & Y). This example uses random forests implementation from the sklearn package.  Learn more

Eagleford Shale FIB-SEM Segmentation
Add-on

Eagleford Shale FIB-SEM Segmentation

Recipe (hxrecipe)

17 Oct 2019 - This recipe guided workflow will result in a 5-phase segmentation applicable to the included dataset and most typical FIB-SEM data. Input Data, the Recipe, Output data are included here.  Learn more

PerGeos TCL script for processing all files in a folder with a recipe
Add-on

PerGeos TCL script for processing all files in a folder with a recipe

Tcl

16 Oct 2019 - Process all files in a folder by applying the same recipe to all of them individually.  Learn more

View Manager
Add-on

View Manager

Tcl

14 Oct 2019 - This module allows storing and retrieving camera settings for viewer windows to be able to switch easily between different view presets.  Learn more

Berea Pore Size Distribution Tutorial
Add-on How-to

Berea Pore Size Distribution Tutorial

Recipe (hxrecipe), Project (hx, pgo), Demo, Data

11 Oct 2019 - Create a semi-automatic workflow for Pore Size Distribution on Berea sandstone.  Learn more

Getting Started with Deep Learning Training for Image Segmentation
Add-on

Getting Started with Deep Learning Training for Image Segmentation

Deep learning model, Data

5 Sep 2019 - This is a model and companion project for the Deep Learning tutorial.  Learn more

BSE SEM Denoiser
Add-on

BSE SEM Denoiser

Deep learning model

21 Jun 2019 - U-Net model for denoising back-scattered SEM images.  Learn more