Xtras Installer for Amira-Avizo 2023.1 and Prior
Add-on

Xtras Installer for Amira-Avizo 2023.1 and Prior

Recipe (hxrecipe), Recipe ISP, IVP, A2D, Deep learning model, Python (pyscro), Tcl, XPand module, Project (hx, pgo), Template, Demo, Data, Misc

30 Jun 2022 - The Xtras Installer is a tool that provides an easy way to install resources from the Xtra Library on to your local machine.  Learn more

Object Separation using Random-Walk Distance Map
Add-on

Object Separation using Random-Walk Distance Map

Recipe ISP, IVP, A2D, Demo, Data

3 Jun 2022 - Recipe utilizing an object separation workflow relying on the Random-Walk Distance Map. It is more robust than Separate Object for noisy segmentation or non-spherical shapes.  Learn more

Bone Segmentation Workflow for Murine Hindpaw
Add-on How-to

Bone Segmentation Workflow for Murine Hindpaw

Recipe ISP, IVP, A2D, Demo, Data

28 Apr 2022 - Semi-automatic workflow and recipe for high-throughput bone segmentation of murine hindpaw micro-CT datasets.  Learn more

Marker Based Watershed Recipe
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Marker Based Watershed Recipe

Recipe ISP, IVP, A2D

17 Nov 2020 - A recipe for applying a Marker Based Watershed (as in the Segmentation Editor) from the Project View.  Learn more

Relative Area Fraction for Amira-Avizo2D
Add-on How-to

Relative Area Fraction for Amira-Avizo2D

Recipe ISP, IVP, A2D, Python (pyscro), Data, Misc

5 Oct 2020 - This Xtra provides a module to help compute the area fraction of a label over the area of another label in Amira-Avizo2D.  Learn more

Segmentation of agglomerated Ni nanoparticles
Add-on

Segmentation of agglomerated Ni nanoparticles

Recipe ISP, IVP, A2D

24 Aug 2020 - This recipe segments overlapping Ni nanoparticles on a high resolution STEM image. A size distribution of the nanoparticles can also be computed.  Learn more

Segmentation of Pathological Osteocytes in an Undecalcified Piece of Mouse Bone using Amira-Avizo2D
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Segmentation of Pathological Osteocytes in an Undecalcified Piece of Mouse Bone using Amira-Avizo2D

Recipe ISP, IVP, A2D

3 Jul 2020 - This is a workflow to segment out osteocytes in mouse bone sample using Amira-Avizo2D.  Learn more

How to Use Deep Learning Models in Amira-Avizo2D Analyzer
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How to Use Deep Learning Models in Amira-Avizo2D Analyzer

Recipe ISP, IVP, A2D, Deep learning model, Data

3 Oct 2019 - Examples showing how to use AI (deep learning models) in an Analyzer recipe (hxisp).  Learn more

How to Batch Process an Image Recipe on a Set of 2D Images with Amira-Avizo2D
Add-on How-to

How to Batch Process an Image Recipe on a Set of 2D Images with Amira-Avizo2D

Recipe ISP, IVP, A2D, Data

18 Sep 2019 - Example of a batch file to perform batch processing on a set of porous silicon SEM images.  Learn more

Three Phase Ti Segmentation
Add-on

Three Phase Ti Segmentation

Recipe ISP, IVP, A2D, Data

24 Jul 2019 - Alpha, Borides, Beta segmentation of FIB Serial Section Dataset of Ti Alloy with Borides  Learn more

Plates in Ti-62222
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Plates in Ti-62222

Recipe ISP, IVP, A2D, Data

24 Jul 2019 - FIB Serial Section of Ti-62222  Learn more

Particles identification in Nickel-Base Superalloy
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Particles identification in Nickel-Base Superalloy

Recipe ISP, IVP, A2D, Python (pyscro), Data

24 Jul 2019 - FIB Serial Section of Particles in Nickel-Base Superalloy  Learn more

Size distribution of Nb-Cu nanoparticles
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Size distribution of Nb-Cu nanoparticles

Recipe ISP, IVP, A2D, Data

26 Jun 2019 - The recipe segments the Nb particles and the Cu particles.  Learn more

Detecting Pores in Porous Silicon
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Detecting Pores in Porous Silicon

Recipe ISP, IVP, A2D, Data

26 Jun 2019 - The recipe detects pores in porous silicon.  Learn more

Porosity in a Battery Separator
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Porosity in a Battery Separator

Recipe ISP, IVP, A2D, Data

26 Jun 2019 - The recipe classifies the pores in a battery separator (SEM image).  Learn more

Porosity in a Polymer Divider
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Porosity in a Polymer Divider

Recipe ISP, IVP, A2D, Demo, Data

26 Jun 2019 - The recipe detects pores in a polymer divider (SEM image).  Learn more

Particle Agglomeration
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Particle Agglomeration

Recipe ISP, IVP, A2D, Data

26 Jun 2019 - The recipe segments particles that are touching each other, and individual ones.  Learn more

Automated Sizing of Large Area Nanoparticles
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Automated Sizing of Large Area Nanoparticles

Recipe ISP, IVP, A2D, Python (pyscro)

25 Jun 2019 - The recipe segments large area Pt-Rh nanoparticles at high resolution (TEM image).  Learn more

Au-Ni-Cl Nanoparticles
Add-on

Au-Ni-Cl Nanoparticles

Recipe ISP, IVP, A2D

25 Jun 2019 - This recipe segments nanoparticles of different element from an EDS map.  Learn more

Polymer Beads
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Polymer Beads

Recipe ISP, IVP, A2D

6 Jun 2019 - Segmentation of the particles located in the foreground of the SEM image.  Learn more