Assay Details

Gene Symbol: SHMT1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001281786.1	NP_001268715.1	5 - 6	690		65
	NM_004169.4	NP_004160.3	6 - 7	806		65
	NM_148918.2	NP_683718.1	6 - 7	806		65
	XM_005256767.3	XP_005256824.1	7 - 8	877		65
	XM_011523992.2	XP_011522294.1	6 - 7	774		65
	XM_017024957.1	XP_016880446.1	6 - 7	631		65
	XM_017024958.1	XP_016880447.1	7 - 8	877		65
	XM_017024959.1	XP_016880448.1	4 - 5	498		65
	XM_017024960.1	XP_016880449.1	4 - 5	498		65
GenBank mRNA	AK223552.1	-	6 - 7	737		65
	AK298415.1	-	5 - 6	622		65
	BC007979.2	-	6 - 7	652	3687873	65
	BC022874.1	-	6 - 7	656	4108106	65
	BC038598.1	-	6 - 7	663	4523709	65
	L11931.1	-	5 - 6	619		65
	L23928.1	-	5 - 6	607		65
	Y14485.1	-	6 - 7	772		65
	Y14486.1	-	1 - 2	917		65

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1700009974.hg.1
This assay targets the same location as HTA transcript cluster(s) TC17001201.hg.1

Set Membership:

Ambion siRNA available

Amplicon length less than or equal to 70

Mammalian Gene Collection

Detect Genomic DNA

Recommended Assay

Homo sapiens

Inventoried

Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene SHMT1

Panther Classification:

Molecular Function -

methyltransferase

transferase

metabolite interconversion enzyme

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000316694.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000316694.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000316694.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000316694.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000316694.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000316694.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000316694.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000316694.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000316694.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000316694.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000316694.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000316694.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000316694.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000316694.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000316694.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000316694.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000316694.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000316694.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000352886.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000352886.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000352886.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000352886.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000352886.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000352886.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000352886.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000352886.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000352886.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000352886.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000352886.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000352886.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000352886.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000352886.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000352886.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000352886.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000352886.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000354098.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000354098.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000354098.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000354098.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000354098.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000354098.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000354098.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000354098.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000354098.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000354098.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000354098.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000354098.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000354098.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000354098.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000395682.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000395682.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000395682.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000395682.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000395682.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000395682.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000395684.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000395684.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000395684.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000395684.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000395684.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000395684.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000395684.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000395684.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000395684.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000395684.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000395684.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000395684.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000579558.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000579558.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000579558.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000579558.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000579558.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000579558.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000579558.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000579558.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000579558.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000579558.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000580002.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000580002.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000580002.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000580002.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000580002.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000580002.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000580002.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000580002.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000580002.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000580002.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000580002.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000580002.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000580002.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000580002.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000580002.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000580002.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000582352.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000582352.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000582352.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000582653.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000582653.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000582653.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000582653.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000582653.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000582653.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000583780.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000583780.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000583780.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000583780.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000617912.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000618902.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000618902.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000618902.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	ENST00000618902.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_001281786.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_001281786.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_001281786.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_001281786.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_001281786.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_001281786.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_001281786.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_001281786.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_001281786.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_001281786.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_001281786.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_001281786.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_001281786.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_001281786.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_001281786.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_001281786.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_001281786.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_004169.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_004169.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_004169.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_004169.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_004169.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_004169.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_004169.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_004169.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_004169.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_004169.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_004169.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_004169.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_004169.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_004169.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_004169.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_004169.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_004169.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_004169.4	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_148918.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_148918.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_148918.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_148918.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_148918.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_148918.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_148918.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_148918.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_148918.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_148918.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_148918.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_148918.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_148918.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_148918.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_148918.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_148918.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NM_148918.2	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1700009974.hg.1	NR_106836.1	Refseq

Availability	Inventoried
Catalog #	4331182
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System Message

Genomic Map