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- Gene Symbol:
-
Xist - Gene Name:
- inactive X specific transcripts
- Gene Aliases:
- A430022B11, AI314753
- Chromosome Location:
- Chr.X: 103460373 - 103483233 on Build GRCm38
- Species:
- Mouse
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: Xist | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_001463.3 | 1 - 2 | 9521 | 65 | ||
| NR_001570.2 | 1 - 2 | 9521 | 65 | |||
| GenBank mRNA | L04961.1 | - | 1 - 2 | 9485 | 65 | |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as MTA transcript cluster(s) TC0X00002775.mm.1Set Membership: |
Amplicon length less than or equal to 70
Recommended Assay
Mus musculus
Mouse Stem Cell Pluripotency
1700
Inventoried
Mouse_Stem_Cell
Probe spans exons
|
Gene Ontology Categories:
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P113537 | AK051106.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P113537 | NR_001463.3 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P113537 | AK051106.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P113537 | NR_001463.3 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P300376 | L04961.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P300376 | NR_001463.3 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P300376 | NR_001570.2 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P300376 | L04961.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P300376 | NR_001463.3 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_52_P300376 | NR_001570.2 | mouse_transcriptome |
| Agilent Mouse Genome CGH Microarray 44K G4426B | A_53_P147879 | - | - |
| Agilent Mouse Genome CGH Microarray 44K G4426B | A_53_P177061 | - | - |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_52_P300376 | L04961.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_52_P300376 | NR_001463.3 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_52_P300376 | NR_001570.2 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_52_P300376 | L04961.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_52_P300376 | NR_001463.3 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_52_P300376 | NR_001570.2 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_52_P300376 | L04961.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_52_P300376 | NR_001463.3 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_52_P300376 | NR_001570.2 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_52_P300376 | L04961.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_52_P300376 | NR_001463.3 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_52_P300376 | NR_001570.2 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_52_P113537 | AK051106.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_52_P113537 | NR_001463.3 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_52_P113537 | AK051106.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_52_P113537 | NR_001463.3 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P145453 | AK051106.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P145453 | L04961.1 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P145453 | NR_001463.3 | mouse_transcriptome |
| Agilent Genotypic Technology designed "Custom Agilent Mus Musculus 8x15k GE Microarray (AMADID-016270) " | A_51_P145453 | AK011511.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P145453 | AK051106.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P145453 | L04961.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P145453 | NR_001463.3 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P145453 | AK011511.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P113537 | AK051106.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P113537 | NR_001463.3 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P113537 | AK051106.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P113537 | NR_001463.3 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P362360 | NR_001463.3 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P362360 | AK011511.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P300376 | L04961.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P300376 | NR_001463.3 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P300376 | NR_001570.2 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P300376 | L04961.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P300376 | NR_001463.3 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_52_P300376 | NR_001570.2 | mouse_transcriptome |
| Agilent Mouse Developmental Microarray 44K G2519A Option 002 | A_66_P129520 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573084 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P14535457 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573109 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573052 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573055 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573056 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573116 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573121 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573047 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573079 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573054 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573113 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573088 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573134 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573049 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573140 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573133 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P15045280 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573085 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573057 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P14535460 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573074 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573081 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573131 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573073 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573110 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573124 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P14535450 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573107 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573071 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573136 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P14535451 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573106 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573045 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573126 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573105 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573077 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P14880737 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573087 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573009 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573128 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573138 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573103 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P14560260 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573129 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573070 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573067 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P32573007 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Mouse Gene 1.0 ST Array | 10606179 | - | - |
| Affymetrix HT MG-430 PM Array Plate | 1427262_PM_at | - | - |
| Affymetrix HT MG-430 PM Array Plate | 1436936_PM_s_at | - | - |
| Affymetrix HT MG-430 PM Array Plate | 1427263_PM_at | - | - |
| Affymetrix Mouse Gene 1.1 ST Array | 10606178 | - | - |
| Mouse Genome 430 2.0 Array | 1427262_at | - | - |
| Mouse Genome 430 2.0 Array | 1427262_PM_at | - | - |
| Mouse Genome 430 2.0 Array | 1427263_PM_at | - | - |
| Mouse Genome 430 2.0 Array | 1427263_at | - | - |
| Mouse Genome 430 2.0 Array | 1436936_PM_s_at | - | - |
| Mouse Genome 430 2.0 Array | 1436936_s_at | - | - |
| Affymetrix GeneChip Mouse Genome 430 2.0 Array | 213742_at | - | - |
| Affymetrix GeneChip Mouse Genome 430 2.0 Array | 213742_PM_at | - | - |
| Affymetrix Murine Genome 6500A Array | Msa12930_at | - | - |
| Affymetrix Mouse Clariom S Array | PSR0X00017517.mm.1 | NR_001463.3.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017517.mm.1 | NR_001463.3 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017517.mm.1 | NR_001570.2.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017517.mm.1 | NR_001570.2 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017517.mm.1 | TC0X00002775.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0X00017518.mm.1 | NR_001463.3.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017518.mm.1 | NR_001463.3 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017518.mm.1 | NR_001570.2.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017518.mm.1 | NR_001570.2 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017518.mm.1 | TC0X00002775.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0X00017520.mm.1 | NR_001463.3.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017520.mm.1 | NR_001463.3 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017520.mm.1 | NR_001570.2.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017520.mm.1 | NR_001570.2 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017520.mm.1 | TC0X00002775.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0X00017525.mm.1 | NR_001463.3.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017525.mm.1 | NR_001463.3 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017525.mm.1 | NR_001570.2.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017525.mm.1 | NR_001570.2 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017525.mm.1 | TC0X00002775.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0X00017523.mm.1 | NR_001463.3.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017523.mm.1 | NR_001463.3 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017523.mm.1 | NR_001570.2.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017523.mm.1 | NR_001570.2 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017523.mm.1 | TC0X00002775.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0X00017516.mm.1 | NR_001463.3.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017516.mm.1 | NR_001463.3 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017516.mm.1 | NR_001570.2.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017516.mm.1 | NR_001570.2 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017516.mm.1 | TC0X00002775.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0X00017519.mm.1 | NR_001463.3.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017519.mm.1 | NR_001463.3 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017519.mm.1 | NR_001570.2.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017519.mm.1 | NR_001570.2 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017519.mm.1 | TC0X00002775.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0X00017522.mm.1 | NR_001463.3.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017522.mm.1 | NR_001463.3 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017522.mm.1 | NR_001570.2.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017522.mm.1 | NR_001570.2 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017522.mm.1 | TC0X00002775.mm.1 | MTA TC |
| Affymetrix Mouse Clariom S Array | PSR0X00017524.mm.1 | NR_001463.3.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017524.mm.1 | NR_001463.3 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017524.mm.1 | NR_001570.2.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017524.mm.1 | NR_001570.2 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR0X00017524.mm.1 | TC0X00002775.mm.1 | MTA TC |
| Mouse Expression Set 430 | 1427263_PM_at | - | - |
| Mouse Expression Set 430 | 1427262_at | - | - |
| Mouse Expression Set 430 | 1436936_PM_s_at | - | - |
| Mouse Expression Set 430 | 1436936_s_at | - | - |
| Mouse Expression Set 430 | 1427263_at | - | - |
| Mouse Expression Set 430 | 1427262_PM_at | - | - |
| Murine Genome U74v2 Set | 99126_PM_at | - | - |
| Murine Genome U74v2 Set | 99126_at | - | - |
| Mouse Genome 430A 2.0 Array | 1427263_at | - | - |
| Mouse Genome 430A 2.0 Array | 1427262_at | - | - |
| Mouse Genome 430A 2.0 Array | 1436936_s_at | - | - |
| Mouse Genome 430A 2.0 Array | 1436936_PM_s_at | - | - |
| Mouse Genome 430A 2.0 Array | 1427262_PM_at | - | - |
| Mouse Genome 430A 2.0 Array | 1427263_PM_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1427263_PM_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1436936_PM_s_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1436936_s_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1427262_PM_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1427262_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1427263_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Mouse Genome Survey Microarray | 396698 | - | - |
| ABI Mouse Genome Survey Microarray | 653772 | - | - |
| ABI Mouse Genome Survey Microarray | 774007 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina mouse-6 v1.0 expression beadchip | 106520068 | - | - |
| Illumina mouse-6 v1.0 expression beadchip | 102630541 | - | - |
| Illumina mouse-6 v1.1 expression beadchip | ILMN_2475156 | - | - |
| Illumina mouse-6 v1.1 expression beadchip | ILMN_1242589 | - | - |
| mouse-6 v1.1 (Illumina) | scl00213742.1_141-S | - | - |
| mouse-6 v1.1 (Illumina) | scl0213742.1_91-S | - | - |
| Illumina Sentrix mouse-6.v1 bead array | 106520068 | - | - |
| Illumina Sentrix mouse-6.v1 bead array | 102630541 | - | - |
| Illumina Sentrix Mouse-6 Expression BeadChip (2) | 102630541 | - | - |
| Illumina Sentrix Mouse-6 Expression BeadChip (2) | 106520068 | - | - |
| MouseRef-8 v2 Expression BeadChip | ILMN_3022688 | - | - |
| MouseRef-8 v2 Expression BeadChip | ILMN_3123341 | - | - |
| Illumina MouseWG-6 v2.0 expression beadchip | ILMN_2475156 | - | - |
| Illumina MouseWG-6 v2.0 expression beadchip | ILMN_3022688 | - | - |
| Illumina MouseWG-6 v2.0 expression beadchip | ILMN_3123341 | - | - |
| Illumina MouseWG-6 v2.0 expression beadchip | ILMN_1224091 | - | - |
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