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          • Home
          • › Search Tool
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          • › Rn00560714_m1
          See other APC GE Assays ›
          Gene Symbol:
          Apc
          Gene Name:
          adenomatous polyposis coli
          Gene Aliases:
          RATAPC
          Chromosome Location:
          Chr.18: 27011706 - 27106323 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn00560714_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Apc
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_012499.1 NP_036631.1 14 - 15 2009 104
          XM_006254506.2 XP_006254568.1 15 - 16 2269 104
          XM_006254508.2 XP_006254570.1 16 - 17 2110 104
          XM_006254509.2 XP_006254571.1 16 - 17 2079 104
          XM_006254510.2 XP_006254572.1 14 - 15 2215 104
          XM_006254511.2 XP_006254573.1 15 - 16 2056 104
          XM_006254512.2 XP_006254574.1 15 - 16 2718 104
          XM_006254513.2 XP_006254575.1 14 - 15 2164 104
          XM_006254515.2 XP_006254577.1 16 - 17 1935 104
          XM_006254518.2 XP_006254580.1 15 - 16 2533 104
          XM_006254520.2 XP_006254582.1 15 - 16 1966 104
          XM_006254521.2 XP_006254583.1 15 - 16 1753 104
          XM_008772015.1 XP_008770237.1 15 - 16 4201 104
          XM_008772016.1 XP_008770238.1 15 - 16 4151 104
          XM_008772017.1 XP_008770239.1 15 - 16 2542 104
          GenBank mRNA D38629.1 - 14 - 15 2009 104

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC1800000255.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length greater than or equal to 101 Apoptosis 3' Most Recommended Assay Rattus norvegicus Rat Wnt Panel Rat Tumor Metastasis Panel 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Apc

          Gene Ontology Categories:

          Function(s) Process(es)

          mitotic cytokinesis
          kidney development
          hair follicle development
          protein complex assembly
          cellular response to DNA damage stimulus
          negative regulation of microtubule depolymerization
          cell cycle arrest
          metaphase/anaphase transition of mitotic cell cycle
          mitotic spindle assembly checkpoint
          establishment or maintenance of cell polarity
          pattern specification process
          axonogenesis
          negative regulation of cell proliferation
          axis specification
          anterior/posterior pattern specification
          dorsal/ventral pattern formation
          proximal/distal pattern formation
          Wnt signaling pathway
          cell migration
          stem cell population maintenance
          negative regulation of Wnt signaling pathway
          regulation of cell migration
          positive regulation of cell migration
          regulation of epithelial cell differentiation
          positive regulation of epithelial cell differentiation
          pancreas development
          positive regulation of microtubule polymerization
          cytoplasmic microtubule organization
          neuron projection development
          positive regulation of pseudopodium assembly
          regulation of microtubule-based process
          T cell differentiation in thymus
          somatic stem cell population maintenance
          negative regulation of odontogenesis
          response to drug
          positive regulation of apoptotic process
          negative regulation of apoptotic process
          negative regulation of MAPK cascade
          skin development
          canonical Wnt signaling pathway involved in negative regulation of apoptotic process
          canonical Wnt signaling pathway involved in positive regulation of apoptotic process
          regulation of cell differentiation
          positive regulation of cell differentiation
          regulation of osteoblast differentiation
          regulation of osteoclast differentiation
          positive regulation of protein catabolic process
          negative regulation of cyclin-dependent protein serine/threonine kinase activity
          positive regulation of cell adhesion
          muscle cell cellular homeostasis
          thymus development
          negative regulation of epithelial cell proliferation
          regulation of nitrogen compound metabolic process
          chromosome organization
          regulation of cell cycle
          positive regulation of cell division
          regulation of attachment of spindle microtubules to kinetochore
          retina development in camera-type eye
          canonical Wnt signaling pathway
          negative regulation of epithelial cell proliferation involved in prostate gland development
          negative regulation of canonical Wnt signaling pathway
          response to alcohol
          cellular response to nerve growth factor stimulus
          regulation of glutamate metabolic process
          protease binding
          protein binding
          beta-catenin binding
          microtubule binding
          protein kinase regulator activity
          protein kinase binding
          protein complex binding
          gamma-catenin binding
          cadherin binding
          microtubule plus-end binding

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P276106 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 108851 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 860162 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 614995 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 115301 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 46042 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 671940 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 770916 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 1447 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 268540 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 957742 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 624758 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 713319 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 770073 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 249046 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 829328 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 40182 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 780284 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 299894 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 363452 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 771827 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 32881 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 938971 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 602319 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 190237 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 882932 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 450815 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 636982 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 921790 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 500622 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 397384 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 344430 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 876227 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 136867 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 870885 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 205993 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 820362 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 305050 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 313604 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 51746 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 626627 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 5818 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 727794 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 855023 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 840674 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 12336 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 55901 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 104167 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 130839 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 74788 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 122855 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 124214 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P276106 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P276106 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P276106 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P276106 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P448864 - -
          Matsumoto (Agilent Rat cDNA Microarray G4105A) 702029771 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 55948 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 63775 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 25106 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 102538 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 34891 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 37703 - -
          Agilent Rat cDNA Microarray (G4105A) 702029771 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10800845 - -
          Affymetrix Rat Gene 1.0 ST Array 10800853 - -
          Affymetrix Rat Gene 1.0 ST Array 10800848 - -
          Affymetrix Rat Gene 1.0 ST Array 10800856 - -
          Affymetrix Rat Gene 1.0 ST Array 10800849 - -
          Affymetrix Rat Gene 1.0 ST Array 10800854 - -
          Affymetrix Rat Gene 1.0 ST Array 10800857 - -
          Affymetrix Rat Gene 1.0 ST Array 10800855 - -
          Affymetrix Rat Gene 1.0 ST Array 10800851 - -
          Affymetrix Rat Gene 1.0 ST Array 10800858 - -
          Affymetrix Rat Gene 1.0 ST Array 10800852 - -
          Affymetrix Rat Gene 1.0 ST Array 10800847 - -
          Affymetrix Rat Gene 1.0 ST Array 10800859 - -
          Affymetrix Rat Gene 1.0 ST Array 10800846 - -
          Affymetrix Rat Gene 1.0 ST Array 10800850 - -
          Affymetrix Rat Gene 1.1 ST Array 10800844 - -
          Rat Genome 230 2.0 Array 1387837_PM_at - -
          Rat Genome 230 2.0 Array 1387837_at - -
          Rat Genome 230 2.0 Array 1376629_at - -
          Rat Genome 230 2.0 Array 1376629_PM_at - -
          Affymetrix HT Rat Focus Array 1387837_at - -
          Affymetrix HT Rat Focus Array 1387837_PM_at - -
          Affymetrix Rat Clariom S Assay PSR1800001856.rn.1 TC1800000255.rn.1 RTA TC
          Rat Expression Set 230 1387837_at - -
          Rat Expression Set 230 1387837_PM_at - -
          Affymetrix Rat Gene 1.0 ST Array 10800844 - -
          Rat Genome U34 Set L19304_s_at - -
          Rat Genome U34 Set D38629_at - -
          Rat Genome U34 Set L19306_s_at - -
          Rat Genome U34 Set rc_AA955065_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 22347878 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1363282 - -
          RatRef-12 Expression BeadChip ILMN_64937 - -

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