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- Gene Symbol:
-
Epas1 - Gene Name:
- endothelial PAS domain protein 1
- Gene Aliases:
- HLF, Hif2a
- Chromosome Location:
- Chr.6: 10306508 - 10385239 on Build Rnor_6.0
- Species:
- Rat
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: Epas1 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_023090.1 | NP_075578.1 | 7 - 8 | 968 | 70 | |
| GenBank mRNA | AJ277828.1 | - | 7 - 8 | 968 | 70 | |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as RTA transcript cluster(s) TC0600000144.rn.1Set Membership: |
Ambion siRNA available
Amplicon length less than or equal to 70
Recommended Assay
Rattus norvegicus
Rat Hypoxia Panel
1700
Inventoried
Probe spans exons
|
Matching Ambion siRNAs:
Panther Classification:
Gene Ontology Categories:
Function(s)
Process(es)
angiogenesis
response to hypoxia
embryonic placenta development
blood vessel remodeling
regulation of heart rate
transcription, DNA-templated
transcription from RNA polymerase II promoter
response to oxidative stress
mitochondrion organization
signal transduction
visual perception
hemopoiesis
cell differentiation
erythrocyte differentiation
lung development
norepinephrine metabolic process
surfactant homeostasis
regulation of transcription from RNA polymerase II promoter in response to oxidative stress
positive regulation of transcription from RNA polymerase II promoter
cell maturation
myoblast fate commitment
iron ion homeostasis
cellular response to hypoxia
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
DNA binding
transcription factor activity, sequence-specific DNA binding
signal transducer activity
transcription factor binding
histone acetyltransferase binding
sequence-specific DNA binding
protein heterodimerization activity
protein dimerization activity
angiogenesis
response to hypoxia
embryonic placenta development
blood vessel remodeling
regulation of heart rate
transcription, DNA-templated
transcription from RNA polymerase II promoter
response to oxidative stress
mitochondrion organization
signal transduction
visual perception
hemopoiesis
cell differentiation
erythrocyte differentiation
lung development
norepinephrine metabolic process
surfactant homeostasis
regulation of transcription from RNA polymerase II promoter in response to oxidative stress
positive regulation of transcription from RNA polymerase II promoter
cell maturation
myoblast fate commitment
iron ion homeostasis
cellular response to hypoxia
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
DNA binding
transcription factor activity, sequence-specific DNA binding
signal transducer activity
transcription factor binding
histone acetyltransferase binding
sequence-specific DNA binding
protein heterodimerization activity
protein dimerization activity
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_44_P177807 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 550116 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 162692 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 786073 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 305718 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 710650 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 365292 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 925332 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 237144 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 74606 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 817586 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 905730 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 918795 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 250853 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 856839 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 284612 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 513272 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 522409 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 942901 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 72175 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 277908 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 84454 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 231194 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 881215 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 67732 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 564027 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 861315 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 109319 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 869259 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 233963 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 351050 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 905805 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 158635 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 537098 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 262465 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 43216 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 935584 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 402850 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 336517 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 327916 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 611061 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 539805 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 196075 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 779978 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 627683 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 725318 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 175139 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 314752 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 601171 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 483614 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 613540 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 562930 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 536568 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 819610 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 77612 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 14569 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 12329 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 139219 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 90539 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 62331 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 168885 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 53428 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_44_P177807 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_44_P177807 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_44_P177807 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_44_P177807 | - | - |
| Matsumoto (Agilent Rat cDNA Microarray G4105A) | 702237192 | - | - |
| Matsumoto (Agilent Rat cDNA Microarray G4105A) | 702131834 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 27932 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 62855 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 64805 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 68514 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 98894 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 94423 | - | - |
| Agilent Rat cDNA Microarray (G4105A) | 702131834 | - | - |
| Agilent Rat cDNA Microarray (G4105A) | 702237192 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Rat Gene 1.0 ST Array | 10882747 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10882740 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10882742 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10882739 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10882744 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10882749 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10882741 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10882737 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10882738 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10882734 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10882736 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10882735 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10882746 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10882745 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10882748 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10882733 | - | - |
| Rat Genome 230 2.0 Array | 1398333_at | - | - |
| Rat Genome 230 2.0 Array | 1369703_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1398333_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1369703_at | - | - |
| Affymetrix HT Rat Focus Array | 1369703_at | - | - |
| Affymetrix HT Rat Focus Array | 1369703_PM_at | - | - |
| Affymetrix Rat Clariom S Assay | PSR0600000839.rn.1 | TC0600000144.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0600000835.rn.1 | TC0600000144.rn.1 | RTA TC |
| Rat Expression Set 230 | 1369703_PM_at | - | - |
| Rat Expression Set 230 | 1369703_at | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10882733 | - | - |
| Rat Genome U34 Set | rc_AA964225_at | - | - |
| Rat Genome U34 Set | rc_AI058681_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Rat Genome Survey Microarray | 22323054 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina ratRef-12 v1.0 expression beadchip | ILMN_1362282 | - | - |
| RatRef-12 Expression BeadChip | ILMN_59510 | - | - |
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