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- Gene Symbol:
-
Arntl - Gene Name:
- aryl hydrocarbon receptor nuclear translocator-like
- Gene Aliases:
- Bmal1
- Chromosome Location:
- Chr.1: 178039063 - 178137469 on Build Rnor_6.0
- Species:
- Rat
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: Arntl | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_024362.2 | NP_077338.2 | 14 - 15 | 1658 | 137 | |
| XM_006230029.2 | XP_006230091.1 | 12 - 13 | 1416 | 137 | ||
| XM_006230030.2 | XP_006230092.1 | 12 - 13 | 1413 | 137 | ||
| XM_008759716.1 | XP_008757938.1 | 12 - 13 | 1356 | 137 | ||
| GenBank mRNA | AB012600.1 | - | 9 - 10 | 1090 | 137 | |
| AF015953.1 | - | 8 - 9 | 987 | 137 | ||
| BC099833.1 | - | 14 - 15 | 1658 | 7936079 | 137 | |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as RTA transcript cluster(s) TC0100002398.rn.1Set Membership: |
Ambion siRNA available
Amplicon length greater than or equal to 101
Mammalian Gene Collection
Recommended Assay
Rattus norvegicus
1700
Inventoried
Probe spans exons
|
Matching Ambion siRNAs:
Panther Classification:
Gene Ontology Categories:
Function(s)
Process(es)
protein import into nucleus, translocation
transcription, DNA-templated
regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
signal transduction
spermatogenesis
circadian rhythm
negative regulation of TOR signaling
circadian regulation of gene expression
regulation of protein catabolic process
regulation of hair cycle
regulation of circadian rhythm
positive regulation of circadian rhythm
proteasome-mediated ubiquitin-dependent protein catabolic process
negative regulation of fat cell differentiation
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
regulation of neurogenesis
regulation of insulin secretion
regulation of cell cycle
response to redox state
positive regulation of canonical Wnt signaling pathway
oxidative stress-induced premature senescence
regulation of type B pancreatic cell development
negative regulation of glucocorticoid receptor signaling pathway
regulation of cellular senescence
positive regulation of skeletal muscle cell differentiation
transcription regulatory region sequence-specific DNA binding
transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding
core promoter sequence-specific DNA binding
core promoter binding
transcriptional activator activity, RNA polymerase II transcription factor binding
DNA binding
transcription factor activity, sequence-specific DNA binding
signal transducer activity
aryl hydrocarbon receptor binding
bHLH transcription factor binding
sequence-specific DNA binding
protein heterodimerization activity
protein dimerization activity
Hsp90 protein binding
E-box binding
protein import into nucleus, translocation
transcription, DNA-templated
regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
signal transduction
spermatogenesis
circadian rhythm
negative regulation of TOR signaling
circadian regulation of gene expression
regulation of protein catabolic process
regulation of hair cycle
regulation of circadian rhythm
positive regulation of circadian rhythm
proteasome-mediated ubiquitin-dependent protein catabolic process
negative regulation of fat cell differentiation
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
regulation of neurogenesis
regulation of insulin secretion
regulation of cell cycle
response to redox state
positive regulation of canonical Wnt signaling pathway
oxidative stress-induced premature senescence
regulation of type B pancreatic cell development
negative regulation of glucocorticoid receptor signaling pathway
regulation of cellular senescence
positive regulation of skeletal muscle cell differentiation
transcription regulatory region sequence-specific DNA binding
transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding
core promoter sequence-specific DNA binding
core promoter binding
transcriptional activator activity, RNA polymerase II transcription factor binding
DNA binding
transcription factor activity, sequence-specific DNA binding
signal transducer activity
aryl hydrocarbon receptor binding
bHLH transcription factor binding
sequence-specific DNA binding
protein heterodimerization activity
protein dimerization activity
Hsp90 protein binding
E-box binding
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_44_P214873 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_64_P117345 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 431332 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 158697 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 84311 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 221548 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 310577 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 499959 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 456919 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 346187 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 943532 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 99890 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 780092 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 967998 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 451419 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 81862 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 61164 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 757106 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 445831 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 378693 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 70187 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 772629 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 813426 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 280570 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 227709 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 148888 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 858132 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 667277 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 339067 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 815783 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 851955 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 905431 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 755600 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 551253 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 102162 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 696273 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 734974 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 247066 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 623852 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 931074 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 114659 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 571104 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 563253 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 623931 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 864404 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 242684 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 39408 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 569717 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 396943 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 197528 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 800621 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 114924 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 480490 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 721511 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 665827 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 271279 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 8652 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 796725 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 405999 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 765427 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 727336 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 828105 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 942254 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 553661 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 838634 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 233063 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 385058 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 83286 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 120413 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 256644 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 128573 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 546865 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 267801 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 841600 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 498479 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 90886 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 895445 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 119733 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 72100 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 157571 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 39258 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 63960 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 127766 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 87575 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 92683 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 97240 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 172546 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 40135 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 6146 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_44_P214873 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P117345 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_44_P214873 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P117345 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_44_P214873 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_64_P117345 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_44_P214873 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 31865 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 83220 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 45735 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 44752 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 38635 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 84962 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 1143 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 93070 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Rat Gene 1.0 ST Array | 10710049 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10710042 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10710050 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10710031 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10710032 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10710046 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10710045 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10710041 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10710035 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10710036 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10710040 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10710038 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10710034 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10710043 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10710029 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10710037 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10710030 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10710039 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10710048 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10710047 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10710033 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10710044 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10710028 | - | - |
| Rat Genome 230 2.0 Array | 1370510_PM_a_at | - | - |
| Rat Genome 230 2.0 Array | 1370510_a_at | - | - |
| Affymetrix HT Rat Focus Array | 1370510_PM_a_at | - | - |
| Affymetrix HT Rat Focus Array | 1370510_a_at | - | - |
| Affymetrix Rat Clariom S Assay | PSR0100018267.rn.1 | TC0100002398.rn.1 | RTA TC |
| Rat Expression Set 230 | 1370510_a_at | - | - |
| Rat Expression Set 230 | 1370510_PM_a_at | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10710028 | - | - |
| Rat Genome U34 Set | AB012600_s_at | - | - |
| Rat Genome U34 Set | AF015953_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Rat Genome Survey Microarray | 21182580 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina ratRef-12 v1.0 expression beadchip | ILMN_1351776 | - | - |
| RatRef-12 Expression BeadChip | ILMN_69475 | - | - |
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