Assay Details

Gene Symbol: Opa1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_133585.3	NP_598269.3	23 - 24	2486		132
	XM_006248497.1	XP_006248559.1	25 - 26	2750		132
	XM_006248498.1	XP_006248560.1	24 - 25	2696		132
	XM_006248499.1	XP_006248561.1	24 - 25	2639		132
GenBank mRNA	AY333988.1	-	23 - 24	2395		132
	AY510274.1	-	23 - 24	2541		132
	BC111071.1	-	23 - 24	2486	7324017	132
	U93197.1	-	7 - 8	692		132

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1100001821.rn.1

Set Membership:

Ambion siRNA available

Amplicon length greater than or equal to 101

Mammalian Gene Collection

Recommended Assay

Rattus norvegicus

1700

Inventoried

Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Opa1

Panther Classification:

Molecular Function -

membrane traffic protein

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Agilent Affymetrix ABI Illumina

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P409729	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	962597	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	153623	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	381252	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	285105	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	445733	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	814496	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	247657	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	953678	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	215758	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	371723	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	163323	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	668038	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	213590	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	277046	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	793660	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	835534	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	472841	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	951111	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	796315	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	311084	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	332734	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	275125	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	699958	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	944905	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	671935	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	24520	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	339304	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	206046	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	963286	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	871000	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	706056	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	100622	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	585803	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	136069	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	626251	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	878058	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	30205	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	55711	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	36133	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	38911	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	92837	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	139156	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P409729	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P409729	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P409729	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P427200	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P409729	-	-
Matsumoto (Agilent Rat cDNA Microarray G4105A)	701621750	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	19575	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	95264	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	97131	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	34722	-	-
Agilent Rat cDNA Microarray (G4105A)	701621750	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10754971	-	-
Affymetrix Rat Gene 1.0 ST Array	10754978	-	-
Affymetrix Rat Gene 1.0 ST Array	10754972	-	-
Affymetrix Rat Gene 1.0 ST Array	10754974	-	-
Affymetrix Rat Gene 1.0 ST Array	10754967	-	-
Affymetrix Rat Gene 1.0 ST Array	10754955	-	-
Affymetrix Rat Gene 1.0 ST Array	10754963	-	-
Affymetrix Rat Gene 1.0 ST Array	10754969	-	-
Affymetrix Rat Gene 1.0 ST Array	10754982	-	-
Affymetrix Rat Gene 1.0 ST Array	10754970	-	-
Affymetrix Rat Gene 1.0 ST Array	10754953	-	-
Affymetrix Rat Gene 1.0 ST Array	10754956	-	-
Affymetrix Rat Gene 1.0 ST Array	10754958	-	-
Affymetrix Rat Gene 1.0 ST Array	10754954	-	-
Affymetrix Rat Gene 1.0 ST Array	10754966	-	-
Affymetrix Rat Gene 1.0 ST Array	10754964	-	-
Affymetrix Rat Gene 1.0 ST Array	10754965	-	-
Affymetrix Rat Gene 1.0 ST Array	10754981	-	-
Affymetrix Rat Gene 1.0 ST Array	10754959	-	-
Affymetrix Rat Gene 1.0 ST Array	10754957	-	-
Affymetrix Rat Gene 1.0 ST Array	10754952	-	-
Affymetrix Rat Gene 1.0 ST Array	10754951	-	-
Affymetrix Rat Gene 1.0 ST Array	10754979	-	-
Affymetrix Rat Gene 1.0 ST Array	10754977	-	-
Affymetrix Rat Gene 1.0 ST Array	10754968	-	-
Affymetrix Rat Gene 1.0 ST Array	10754960	-	-
Affymetrix Rat Gene 1.0 ST Array	10754980	-	-
Affymetrix Rat Gene 1.0 ST Array	10754976	-	-
Affymetrix Rat Gene 1.0 ST Array	10754961	-	-
Affymetrix Rat Gene 1.0 ST Array	10754962	-	-
Affymetrix Rat Gene 1.1 ST Array	10754950	-	-
Rat Genome 230 2.0 Array	1387225_at	-	-
Rat Genome 230 2.0 Array	1387225_PM_at	-	-
Affymetrix HT Rat Focus Array	1387225_at	-	-
Affymetrix HT Rat Focus Array	1387225_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR1100011548.rn.1	TC1100001821.rn.1	RTA TC
Rat Expression Set 230	1387225_PM_at	-	-
Rat Expression Set 230	1387225_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10754950	-	-
Rat Genome U34 Set	U93197_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21824950	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1355429	-	-
RatRef-12 Expression BeadChip	ILMN_62200	-	-

Availability	Inventoried
Catalog #	4331182
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System Message

Genomic Map