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          • Home
          • › Search Tool
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          • › Rn00598349_m1
          See other AGRN GE Assays ›
          Gene Symbol:
          Agrn
          Gene Name:
          agrin
          Gene Aliases:
          AGR
          Chromosome Location:
          Chr.5: 173589910 - 173622808 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn00598349_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price 284.00
          Your Price
          Online offer: 266.65
          266.65
          Check your price ›
          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Agrn
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_175754.1 NP_786930.1 11 - 12 2139 86
          XM_006239541.2 XP_006239603.1 12 - 13 2344 86
          XM_006239542.2 XP_006239604.1 12 - 13 2344 86
          XM_008764338.1 XP_008762560.1 12 - 13 2344 86
          XM_008764339.1 XP_008762561.1 12 - 13 2344 86
          XM_008764340.1 XP_008762562.1 11 - 12 2039 86
          GenBank mRNA M64780.1 - 11 - 12 2139 86

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC0500004230.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length between 86 and 100 Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Agrn

          Panther Classification:

          Molecular Function -

          protease inhibitor

          Gene Ontology Categories:

          Function(s) Process(es)

          regulation of protein phosphorylation
          positive regulation of protein phosphorylation
          plasma membrane organization
          chemical synaptic transmission
          synapse assembly
          neuromuscular junction development
          regulation of synaptic growth at neuromuscular junction
          regulation of receptor activity
          positive regulation of protein binding
          receptor clustering
          positive regulation of neuron apoptotic process
          neurotransmitter receptor metabolic process
          positive regulation of synaptic growth at neuromuscular junction
          positive regulation of transcription from RNA polymerase II promoter
          protein heterotetramerization
          positive regulation of filopodium assembly
          regulation of microtubule cytoskeleton organization
          skeletal muscle acetylcholine-gated channel clustering
          regulation of axon guidance
          positive regulation of protein geranylgeranylation
          dystroglycan binding
          calcium ion binding
          protein binding
          acetylcholine receptor regulator activity
          sialic acid binding
          chondroitin sulfate binding
          BMP binding
          heparan sulfate proteoglycan binding
          transforming growth factor beta binding

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P082197 - -
          Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P025069 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 112601 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 951706 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 947340 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 707391 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 120478 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 819208 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 457740 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 41514 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 154969 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 227117 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 924592 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 757672 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 367599 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 949709 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 601670 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 517161 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 153220 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 299365 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 164912 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 48091 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 153896 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 14904 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P082197 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P025069 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P025069 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P082197 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P025069 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P082197 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P416633 - -
          Matsumoto (Agilent Rat cDNA Microarray G4105A) 700884318 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 78039 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 72443 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 42328 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 79998 - -
          Agilent Rat cDNA Microarray (G4105A) 700884318 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10882296 - -
          Affymetrix Rat Gene 1.0 ST Array 10882311 - -
          Affymetrix Rat Gene 1.0 ST Array 10882285 - -
          Affymetrix Rat Gene 1.0 ST Array 10882284 - -
          Affymetrix Rat Gene 1.0 ST Array 10882294 - -
          Affymetrix Rat Gene 1.0 ST Array 10882282 - -
          Affymetrix Rat Gene 1.0 ST Array 10882283 - -
          Affymetrix Rat Gene 1.0 ST Array 10882302 - -
          Affymetrix Rat Gene 1.0 ST Array 10882314 - -
          Affymetrix Rat Gene 1.0 ST Array 10882310 - -
          Affymetrix Rat Gene 1.0 ST Array 10882276 - -
          Affymetrix Rat Gene 1.0 ST Array 10882306 - -
          Affymetrix Rat Gene 1.0 ST Array 10882304 - -
          Affymetrix Rat Gene 1.0 ST Array 10882300 - -
          Affymetrix Rat Gene 1.0 ST Array 10882289 - -
          Affymetrix Rat Gene 1.0 ST Array 10882274 - -
          Affymetrix Rat Gene 1.0 ST Array 10882277 - -
          Affymetrix Rat Gene 1.0 ST Array 10882279 - -
          Affymetrix Rat Gene 1.0 ST Array 10882290 - -
          Affymetrix Rat Gene 1.0 ST Array 10882303 - -
          Affymetrix Rat Gene 1.0 ST Array 10882281 - -
          Affymetrix Rat Gene 1.0 ST Array 10882308 - -
          Affymetrix Rat Gene 1.0 ST Array 10882309 - -
          Affymetrix Rat Gene 1.0 ST Array 10882299 - -
          Affymetrix Rat Gene 1.0 ST Array 10882275 - -
          Affymetrix Rat Gene 1.0 ST Array 10882297 - -
          Affymetrix Rat Gene 1.0 ST Array 10882287 - -
          Affymetrix Rat Gene 1.0 ST Array 10882305 - -
          Affymetrix Rat Gene 1.0 ST Array 10882301 - -
          Affymetrix Rat Gene 1.0 ST Array 10882286 - -
          Affymetrix Rat Gene 1.0 ST Array 10882293 - -
          Affymetrix Rat Gene 1.0 ST Array 10882307 - -
          Affymetrix Rat Gene 1.0 ST Array 10882288 - -
          Affymetrix Rat Gene 1.0 ST Array 10882298 - -
          Affymetrix Rat Gene 1.0 ST Array 10882313 - -
          Affymetrix Rat Gene 1.0 ST Array 10882295 - -
          Affymetrix Rat Gene 1.0 ST Array 10882312 - -
          Affymetrix Rat Gene 1.0 ST Array 10882291 - -
          Affymetrix Rat Gene 1.0 ST Array 10882292 - -
          Affymetrix Rat Gene 1.1 ST Array 10882273 - -
          Rat Genome 230 2.0 Array 1370307_at - -
          Rat Genome 230 2.0 Array 1370307_PM_at - -
          Affymetrix HT Rat Focus Array 1370307_at - -
          Affymetrix HT Rat Focus Array 1370307_PM_at - -
          Affymetrix Rat Clariom S Assay PSR0500032332.rn.1 TC0500004230.rn.1 RTA TC
          Rat Expression Set 230 1370307_at - -
          Rat Expression Set 230 1370307_PM_at - -
          Affymetrix Rat Gene 1.0 ST Array 10882273 - -
          Rat Genome U34 Set M64780_at - -
          Rat Genome U34 Set M64780_g_at - -
          Rat Genome U34 Set M64780_g_at - -
          Rat Genome U34 Set M64780_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 21199146 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1355654 - -
          RatRef-12 Expression BeadChip ILMN_49490 - -

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