Assay Details

Gene Symbol: CLCN1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_000083.2	NP_000074.2	20 - 21	2496		113
	NR_046453.1		19 - 20	2349		113
	XM_011515782.2	XP_011514084.1	10 - 11	1244		113
	XM_017011739.1	XP_016867228.1	17 - 18	2221		113
	XM_017011740.1	XP_016867229.1	17 - 18	2197		113
GenBank mRNA	BC112156.1	-	20 - 21	2461	8327624	113
	BC113495.1	-	20 - 21	2461	8322547	113
	BC143796.1	-	19 - 20	2314		113
	M97820.1	-	17 - 18	1900		113
	Z25884.1	-	20 - 21	2496		113

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0700009491.hg.1
This assay targets the same location as HTA transcript cluster(s) TC07000934.hg.1

Set Membership:

Ambion siRNA available

Amplicon length greater than or equal to 101

Mammalian Gene Collection

Homo sapiens

Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene CLCN1

Panther Classification:

Molecular Function -

ion channel

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix

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Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR07014450.hg.1	ENST00000343257.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR07014450.hg.1	NM_000083.2	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR07014450.hg.1	TC07000934.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR0700167468.hg.1	ENST00000343257.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0700167468.hg.1	NM_000083.2	Refseq
Affymetrix Human Clariom D Assay	PSR0700167468.hg.1	NR_046453.1	Refseq
Affymetrix Human Clariom D Assay	PSR0700167468.hg.1	ENST00000343257.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0700167468.hg.1	NM_000083.2	Refseq
Affymetrix Human Clariom D Assay	PSR0700167468.hg.1	NR_046453.1	Refseq
Affymetrix Human Clariom D Assay	PSR0700167468.hg.1	TC0700009491.hg.1	Clariom D TC

System Message

Genomic Map