Name: [Hs00884733_cn] [PIGT]
Creator: Thermo Fisher Scientific
Keywords: [PIGT] Assay, [phosphatidylinositol glycan anchor biosynthesis class T] Assay

Genomic Map

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Assay Details

Target Gene Details

Entrez Gene ID:	51604
Gene Name:	phosphatidylinositol glycan anchor biosynthesis class T
Gene Aliases:	CGI-06, MCAHS3, NDAP, PNH2
Location:	Chr.20:45416067-45426245 on Build GRCh38
Assay Gene Location:	Within Exon 10

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PIGT	NM_001184728.2	9	1241	NP_001171657.1
	NM_001184729.2	9	1208	NP_001171658.1
	NM_001184730.2	8	1103	NP_001171659.1
	NM_015937.5	10	1409	NP_057021.2
	NR_047691.1	10	1369
	NR_047692.1	9	1312
	NR_047693.1	9	1308
	NR_047694.1	9	1231
	NR_047695.1	7	1002
	XM_005260430.2	7	880	XP_005260487.1
	XM_005260432.2	9	1203	XP_005260489.1
	AB057724.1	10	1319	BAB60854.1
	AF132940.1	10	1313	AAD27715.1
	AK075469.1	10	1333	BAC11639.1
	AK225517.1	9	1138
	AK293294.1	9	1232
	AK293686.1	9	1154
	AK296063.1	9	1238
	AK296139.1	9	1164
	AK297830.1	5	888
	AK299013.1	7	928
	AK302093.1	8	1061
	AK311100.1
	AK316358.1	10	1295
	AL121742.1	10	1312	CAB57341.1
	AY358588.1	10	1316	AAQ88951.1
	BC015022.1	10	1338
	BC110892.1	10	1317	AAI10893.1
	BC136827.1	10	1347
	BC136828.1	10	1347
	BX537612.1	7	2546	CAD97799.1

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1056102	Chr.20:44673341 - 45636248 on Build GRCh38	Loss	WFDC8 SDC4 WFDC10A TP53TG5 STK4 MIR6812 MATN4 TOMM34 DBNDD2 WFDC2 EPPIN-WFDC6 KCNK15 WISP2 PIGT SEMG2 WFDC6 YWHAB PI3 SYS1-DBNDD2 PABPC1L KCNK15-AS1 RBPJL SLPI STK4-AS1 KCNS1 WFDC5 SYS1 EPPIN SEMG1 WFDC9 SPINT3 RIMS4 WFDC12
dgv4319n100	Chr.20:45384898 - 45428463 on Build GRCh38	Gain	MIR6812 SYS1-DBNDD2 PIGT DBNDD2