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- Gene Symbol
- CTDSPL
- Assay Reference Genome
Location
Chr.3:37941083 on build GRCh38- Cytoband
- 3p22.2
Genomic Map
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Target Gene Details
Entrez Gene ID: | 10217 |
Gene Name: | CTD small phosphatase like |
Gene Aliases: |
C3orf8, HYA22, PSR1, RBSP3, SCP3 |
Location: |
Chr.3:37862152-37984469 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| CTDSPL | NM_001008392.1 | NP_001008393.1 | ||
| NM_005808.2 | NP_005799.2 | |||
| XM_017005519.1 | XP_016861008.1 | |||
| XM_017005520.1 | XP_016861009.1 | |||
| AI143812.1 | ||||
| AI192993.1 | ||||
| AJ575644.1 | CAE11804.1 | |||
| AJ575645.1 | CAE11805.1 | |||
| AY279532.1 | AAP34400.1 | |||
| AY364238.1 | AAQ76797.1 | |||
| D88153.1 | BAA21667.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| dgv8282n54 | Chr.3:37933442 - 37945349 on Build GRCh38 | Loss |
 CTDSPL
|
| nsv3767 | Chr.3:37908338 - 37952367 on Build GRCh38 | Deletion |
CTDSPL
|
| nsv590076 | Chr.3:37936223 - 37951049 on Build GRCh38 | Loss |
CTDSPL
|
| nsv980087 | Chr.3:37936620 - 37945108 on Build GRCh38 | Deletion |
CTDSPL
|
| esv3561753 | Chr.3:37936510 - 37945509 on Build GRCh38 | Deletion |
CTDSPL
|
| dgv2510n106 | Chr.3:37936909 - 37945436 on Build GRCh38 | Deletion |
CTDSPL
|
| esv2725159 | Chr.3:37936949 - 37945435 on Build GRCh38 | Deletion |
CTDSPL
|
| nsv428416 | Chr.3:37864474 - 38062733 on Build GRCh38 | Loss |
DLEC1
PLCD1
MIR26A1
VILL
CTDSPL
|
| esv2676043 | Chr.3:37936926 - 37945436 on Build GRCh38 | Deletion |
CTDSPL
|
| esv25990 | Chr.3:37936979 - 37945385 on Build GRCh38 | Loss |
CTDSPL
|
| dgv1368e212 | Chr.3:37934862 - 37945439 on Build GRCh38 | Loss |
CTDSPL
|
| esv2759140 | Chr.3:37789992 - 38062733 on Build GRCh38 | Loss |
DLEC1
PLCD1
MIR26A1
VILL
CTDSPL
ITGA9-AS1
ITGA9
|
| nsv442857 | Chr.3:37940613 - 37945437 on Build GRCh38 | Loss |
CTDSPL
|
| nsv517156 | Chr.3:37940970 - 37944758 on Build GRCh38 | Loss |
CTDSPL
|
| esv3595902 | Chr.3:37936854 - 37945441 on Build GRCh38 | Loss |
CTDSPL
|
| esv32619 | Chr.3:37939464 - 37944644 on Build GRCh38 | Loss |
CTDSPL
|
| dgv802n67 | Chr.3:37937761 - 37945414 on Build GRCh38 | Loss |
CTDSPL
|
| esv2760795 | Chr.3:37940617 - 37945651 on Build GRCh38 | Loss |
CTDSPL
|
| esv3893683 | Chr.3:37938391 - 37951049 on Build GRCh38 | Loss |
CTDSPL
|
| dgv4721n100 | Chr.3:37933317 - 37945639 on Build GRCh38 | Loss |
CTDSPL
|
| nsv437329 | Chr.3:37935926 - 37954777 on Build GRCh38 | Loss |
CTDSPL
|
Back To TopMore Information
Additional Information:
For this assay, SNP(s) [rs142342380] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Gene Ontology Categories:
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