New
Getting Started with Amira-Avizo Software
Demo
8 Jul 2026 - Two videos introducing the layout and basic interactivity within Thermo Scientific Amira-Avizo Software. Learn more
New
How to Visualize 3D Image Data
Demo
8 Jul 2026 - Amira and Avizo provide several ways to view 3D image data. This video explains how to view 3D image data as a series of 2D Ortho Slices, as an Isosurface, and as a direct 3D Volume Rendering. Learn more
New
How to Load 3D Image Data into Amira-Avizo Software
Demo
8 Jul 2026 - Nearly all Amira-Avizo projects begin by loading image data. This brief tutorial explains how to load 2D and 3D image data from disk. Learn more
New
How to Save an Amira-Avizo Project
Demo
8 Jul 2026 - It is important to save and share work done in Amira-Avizo Software. Project files are used to restore a prior session. This video explains how to save your entire project, including considerations for disk space, recomputation, and portability. Learn more
New
How to Automate Routines with Recipes
Demo
8 Jul 2026 - Routine image processing and analysis steps can be automated using the flexible Recipes concept in Amira-Avizo Software. These videos explain how to create, modify, and reuse Recipes. Advanced topics are covered. Learn more
New
Introduction to the Segmentation+ Workroom Interface
Demo
8 Jul 2026 - Many segmentation projects benefit from a specialist's manual selections. This short tutorial explains the interface used for manual segmentation in Amira and Avizo Software. Learn more
New
How to Use Interactive Segmentation Tools in Segmentation+ Workroom
Demo
8 Jul 2026 - These two tutorials list the most commonly used segmentation tools in Amira and Avizo Software. The combination of tools provides excellent flexibility for full segmentation projects or for establishing ground truth used in Deep Learning model training. Learn more
New
How to Make Animations with the Animation Director
Demo
8 Jul 2026 - Animations are a highly compelling tool for disseminating the research you do with Amira-Avizo Software and your associated imaging tools. These videos explain how to use the Animation Director for flexible and high-quality animation production. Learn more
New
How to Animate Appearance and Disappearance
Demo
8 Jul 2026 - This video explains a basic way to animate the appearance and disappearance of displays in Amira-Avizo Software. Learn more
New
How to Use Volume Edit for Custom ROI Selection and Cropping
Demo
8 Jul 2026 - This tutorial explores the Volume Edit module: a versatile way of modifying a dataset to remove sample holders or irrelevant objects before visualization and segmentation. Learn more
New
How to Manage Multi-Channel Data
Demo
8 Jul 2026 - Often, optical and spectroscopy data are stored as independent channels - each containing unique information as image fields. This tutorial explains how to relate 2 or more datasets in Amira-Avizo Software using the Multi-channel Field object. Learn more
New
Python (pyscro)
29 May 2026 - This module allows for reading HDF5 file produced by TOFWERK ToF-SIMS detector. Learn more
New
Python (pyscro)
27 May 2026 - ToFSIMS collection of visualization modules for Exum Massbox mass spectrometer HDF5 data, Learn more
New
Python (pyscro)
24 May 2026 - ToFSIMS collection of visualization modules for AutoSlice&View ToFSIMS imaging workflow and ToFWerk HDF5 data, Learn more
New
Amira-Avizo eLearning datasets: Image Segmentation
Data
24 May 2026 - This repository contains all the practice datasets within the Image Segmentation eLearning lessons. Learn more
ML/DL Object Classification and Accuracy Assessment
Python (pyscro), Demo
26 Feb 2026 - Train and Infer the class of segmented objects using Machine or Deep Learning methods. Learn more
Python (pyscro)
26 Nov 2025 - This module generates the 3D convex hull of a volume from a binary label image. Learn more
Deep learning model, Python (pyscro), Project (hx, pgo)
23 Oct 2025 - Use pre-trained CellPose models for prediction of instance-level segmentation and labeling in both 2D and 3D data, applicable to a variety of generalized objects. Learn more
Deploy ROI Extractor and Patch Extractor Modules
Tcl
16 Jan 2025 - This Xtra allows for ROI Extractor and Patch Extractor modules deployment. Learn more
Recipe (hxrecipe), XPand module, Project (hx, pgo), Demo, Data
4 Dec 2024 - Using the DECT modules, one can calculate density and effective atomic number for the sample on a voxel-by-voxel basis. Learn more