New
Python (pyscro)
29 May 2026 - This module allows for reading HDF5 file produced by TOFWERK ToF-SIMS detector. Learn more
New
Python (pyscro)
27 May 2026 - ToFSIMS collection of visualization modules for Exum Massbox mass spectrometer HDF5 data, Learn more
New
Python (pyscro)
24 May 2026 - ToFSIMS collection of visualization modules for AutoSlice&View ToFSIMS imaging workflow and ToFWerk HDF5 data, Learn more
New
Amira-Avizo eLearning datasets: Image Segmentation
Data
24 May 2026 - This repository contains all the practice datasets within the Image Segmentation eLearning lessons. Learn more
ML/DL Object Classification and Accuracy Assessment
Python (pyscro), Demo
26 Feb 2026 - Train and Infer the class of segmented objects using Machine or Deep Learning methods. Learn more
Python (pyscro)
26 Nov 2025 - This module generates the 3D convex hull of a volume from a binary label image. Learn more
Deep learning model, Python (pyscro), Project (hx, pgo)
23 Oct 2025 - Use pre-trained CellPose models for prediction of instance-level segmentation and labeling in both 2D and 3D data, applicable to a variety of generalized objects. Learn more
Deploy ROI Extractor and Patch Extractor Modules
Tcl
16 Jan 2025 - This Xtra allows for ROI Extractor and Patch Extractor modules deployment. Learn more
Recipe (hxrecipe), XPand module, Project (hx, pgo), Demo, Data
4 Dec 2024 - Using the DECT modules, one can calculate density and effective atomic number for the sample on a voxel-by-voxel basis. Learn more
Data
22 Nov 2024 - Three-dimensional datasets of rocks and other porous micro-structures. Learn more
Avizo 3D for Industrial Inspection - Metrology Workroom Data
Data
23 Oct 2024 - Three-dimensional dataset for Industrial Inspection (Metrology Workroom). Learn more
Segmentation+ Workroom Tutorial
Demo
2 May 2024 - Discover the Segmentation+ workroom, a powerful tool for interactive 3D image segmentation. This tutorial offers a comprehensive overview of the segmentation process, covering essential principles and tools. Learn more
How to Use the Arithmetic Module
Demo
2 Jan 2024 - This series of video tutorials introduces the Arithmetic module and examples of use cases. Learn more
Python (pyscro)
11 Sep 2023 - A set of four templates to create rapid and efficient visualization of your data Learn more
Python (pyscro)
6 Mar 2023 - A module to enter and execute Python code from Amira-Avizo Software interface. Learn more
AI Assisted Tool for CryoEM Segmentation
Demo, Data
28 Nov 2022 - Here we provide a tutorial to interactively segment a cellular cryo-electron tomography image using the AI assisted segmentation tool of the Segmentation+ workroom. Learn more
Python (pyscro)
17 Nov 2022 - This module allows you to run a given recipe while varying a chosen parameter value of any of the modules making up the recipe. Learn more
Tcl
18 Oct 2022 - This Xtra arranges all materials of a surface in a grid view. Learn more
XPand module
8 Sep 2022 - This Xtra provides a module that evaluates a scalar field at each point of a Spatial Graph and stores the result as the thickness attribute of the resulting Spatial Graph. Learn more
Volume Operations: Flip, Swap, Auto-Crop, and Enlarge
XPand module
8 Sep 2022 - This Xtra contains a set of modules that allow you to perform and automate volume operations on your data. Learn more