New
Python (pyscro)
26 Nov 2025 - This module generates the 3D convex hull of a volume from a binary label image. Learn more
New
Deep learning model, Python (pyscro), Project (hx, pgo)
23 Oct 2025 - Use pre-trained CellPose models for prediction of instance-level segmentation and labeling in both 2D and 3D data, applicable to a variety of generalized objects. Learn more
New
Object Classification from Label Analysis Features
Python (pyscro), Project (hx, pgo)
23 Oct 2025 - Train and Infer the class of segmented objects using shape and intensity features. Learn more
New
Tutorial PreTrained AI models for Model Manager
Deep learning model
22 Oct 2025 - Pretrained models of the Deep Learning Tutorial, to populate the newly introduced Model Manager and Model Comparison panel (Compatible only with Amira-Avizo 2025.1) Learn more
Deploy ROI Extractor and Patch Extractor Modules
Tcl
16 Jan 2025 - This Xtra allows for ROI Extractor and Patch Extractor modules deployment. Learn more
Recipe (hxrecipe), XPand module, Project (hx, pgo), Demo, Data
4 Dec 2024 - Using the DECT modules, one can calculate density and effective atomic number for the sample on a voxel-by-voxel basis. Learn more
Data
22 Nov 2024 - Three-dimensional datasets of rocks and other porous micro-structures. Learn more
Avizo 3D for Industrial Inspection - Metrology Workroom Data
Data
23 Oct 2024 - Three-dimensional dataset for Industrial Inspection (Metrology Workroom). Learn more
Segmentation+ Workroom Tutorial
Demo
2 May 2024 - Discover the Segmentation+ workroom, a powerful tool for interactive 3D image segmentation. This tutorial offers a comprehensive overview of the segmentation process, covering essential principles and tools. Learn more
How to Use the Arithmetic Module
Demo
2 Jan 2024 - This series of video tutorials introduces the Arithmetic module and examples of use cases. Learn more
Trabecular Segmentation Workflow for Murine Tibial Bone
Recipe (hxrecipe), Project (hx, pgo), Demo, Data
11 Dec 2023 - Here we provide a workflow to easily obtain the segmentation of trabecular bones. Learn more
Visualize Identified Molecules of a Cryo-Tomogram
Python (pyscro), Project (hx, pgo)
4 Dec 2023 - This Xtra provides the means to import results from template matching and visualize them with the Molecule Cloud View module. In addition, a module is provided to crop point clouds according to an ROI-box. Learn more
Python (pyscro)
11 Sep 2023 - A set of four templates to create rapid and efficient visualization of your data Learn more
Python (pyscro)
6 Mar 2023 - A module to enter and execute Python code from Amira-Avizo Software interface. Learn more
AI Assisted Tool for CryoEM Segmentation
Demo, Data
28 Nov 2022 - Here we provide a tutorial to interactively segment a cellular cryo-electron tomography image using the AI assisted segmentation tool of the Segmentation+ workroom. Learn more
Python (pyscro)
17 Nov 2022 - This module allows you to run a given recipe while varying a chosen parameter value of any of the modules making up the recipe. Learn more
Tcl
18 Oct 2022 - This Xtra arranges all materials of a surface in a grid view. Learn more
XPand module
8 Sep 2022 - This Xtra provides a module that evaluates a scalar field at each point of a Spatial Graph and stores the result as the thickness attribute of the resulting Spatial Graph. Learn more
Volume Operations: Flip, Swap, Auto-Crop, and Enlarge
XPand module
8 Sep 2022 - This Xtra contains a set of modules that allow you to perform and automate volume operations on your data. Learn more
XPand module
1 Sep 2022 - The Xtra module extracts single objects based on label information listed in a Label Analysis. Learn more