What outputs does the Oncomine Immune Response Research Plugin produce?
The plugin produces the following files:
-Summary report for all barcodes or samples processed in the same run
-Absolute read counts
-RPM data
-Expression data normalized by mean expression of housekeeping genes (scaled log2)
-CHP files derived from RPM
-CHP files derived from data normalized with housekeeping genes
-Background expression data from negative controls, genomic DNA, & H20
-Summary report for all barcodes or samples processed in the same run
-Absolute read counts
-RPM data
-Expression data normalized by mean expression of housekeeping genes (scaled log2)
-CHP files derived from RPM
-CHP files derived from data normalized with housekeeping genes
-Background expression data from negative controls, genomic DNA, & H20