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LOADING
Gene Symbol:
ATRX
Entrez Gene ID
546
Gene Name:
ATRX, chromatin remodeler
Gene Aliases
ATR2, JMS, MRX52, MRXHF1, RAD54, RAD54L, SFM1, SHS, XH2, XNP, ZNF-HX
Gene Chromosome Location
Chr.X: on Build GRCh38
UniGene
Hs.533526
Species:
Human
Primer Chromosome Location
Chr.X: 77508456-77508591 on Build GRCh38
View in UCSC browser
Amplicon Length
136
Primer Sequences
Log in to view
Ampliseq ID's
Primer ID
Hs00528287_CE
Primer 5'-tail Option
Non-tailed
M13-tailed
Purification
Desalted
HPLC
Primer Pair /FWD/REV
Pair
Forward
Reverse
Synthesis Scale
25 nmol
Availability
Made To Order
Catalog #'s
A15629,A15630
Price
Add To Cart
Genomic Map
Assay Details
More Information
Genomic Map
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Assay Details
Gene Information
ATRX
Accession
Protein
COSMIC ID
Mutation
AA
RefSeq
NM_000489.4
NP_000480.3
-
-
-
NM_138270.3
NP_612114.2
-
-
-
XM_005262153.4
XP_005262210.2
-
-
-
XM_005262154.4
XP_005262211.2
-
-
-
XM_005262155.4
XP_005262212.2
-
-
-
XM_005262156.4
XP_005262213.2
-
-
-
XM_005262157.4
XP_005262214.2
-
-
-
XM_006724666.3
XP_006724729.1
-
-
-
XM_006724667.3
XP_006724730.1
-
-
-
XM_017029601.1
XP_016885090.1
-
-
-
XM_017029602.1
XP_016885091.1
-
-
-
XM_017029603.1
XP_016885092.1
-
-
-
XM_017029604.1
XP_016885093.1
-
-
-
XM_017029605.1
XP_016885094.1
-
-
-
XM_017029606.1
XP_016885095.1
-
-
-
XM_017029607.1
XP_016885096.1
-
-
-
XM_017029608.1
XP_016885097.1
-
-
-
XM_017029609.1
XP_016885098.1
-
-
-
XM_017029610.1
XP_016885099.1
-
-
-
XM_017029611.1
XP_016885100.1
-
-
-
GenBank
AB102641.1
BAC81110.1
-
-
-
AK295107.1
-
-
-
AK296959.1
-
-
-
AK297183.1
-
-
-
BX647222.1
-
-
-
ENST00000373344.0
-
-
-
U09820.1
AAC50069.1
-
-
-
U72936.2
AAB49969.1
-
-
-
U72937.2
AAB49970.2
-
-
-
U72938.2
AAB49971.2
-
-
-
Phenotype
MIM: 300504
MIM: 300032
Literature Links:
ATRX
PubMed Links
SNP ID
rs782094199
rs782687209
rs781817460
rs782695845
rs782676263
rs149242238
rs782525976
Submission count
NA
Allele Nomenclature
Chromosome Location
Chr.X: 77508497-77508497 on Build GRCh38
Allele Frequency
1000Genome
Applied Biosystems
®
HapMap
Global - Not Available
Caucasian - Not Available
CEPH (CEU) - Not Available
EAS - Not Available
African American - Not Available
YRI (Yoruba) - Not Available
SAS - Not Available
Chinese - Not Available
CHB (Han Chinese) - Not Available
AFR - Not Available
Japanese - Not Available
JPT (Japanese) - Not Available
EUR - Not Available
AMR - Not Available
Submission count
NA
Allele Nomenclature
Chromosome Location
Chr.X: 77508524-77508524 on Build GRCh38
Allele Frequency
1000Genome
Applied Biosystems
®
HapMap
Global - Not Available
Caucasian - Not Available
CEPH (CEU) - Not Available
EAS - Not Available
African American - Not Available
YRI (Yoruba) - Not Available
SAS - Not Available
Chinese - Not Available
CHB (Han Chinese) - Not Available
AFR - Not Available
Japanese - Not Available
JPT (Japanese) - Not Available
EUR - Not Available
AMR - Not Available
Submission count
NA
Allele Nomenclature
Chromosome Location
Chr.X: 77508495-77508495 on Build GRCh38
Allele Frequency
1000Genome
Applied Biosystems
®
HapMap
Global - Not Available
Caucasian - Not Available
CEPH (CEU) - Not Available
EAS - Not Available
African American - Not Available
YRI (Yoruba) - Not Available
SAS - Not Available
Chinese - Not Available
CHB (Han Chinese) - Not Available
AFR - Not Available
Japanese - Not Available
JPT (Japanese) - Not Available
EUR - Not Available
AMR - Not Available
Submission count
NA
Allele Nomenclature
Chromosome Location
Chr.X: 77508504-77508504 on Build GRCh38
Allele Frequency
1000Genome
Applied Biosystems
®
HapMap
Global - Not Available
Caucasian - Not Available
CEPH (CEU) - Not Available
EAS - Not Available
African American - Not Available
YRI (Yoruba) - Not Available
SAS - Not Available
Chinese - Not Available
CHB (Han Chinese) - Not Available
AFR - Not Available
Japanese - Not Available
JPT (Japanese) - Not Available
EUR - Not Available
AMR - Not Available
Submission count
NA
Allele Nomenclature
Chromosome Location
Chr.X: 77508503-77508503 on Build GRCh38
Allele Frequency
1000Genome
Applied Biosystems
®
HapMap
Global - Not Available
Caucasian - Not Available
CEPH (CEU) - Not Available
EAS - Not Available
African American - Not Available
YRI (Yoruba) - Not Available
SAS - Not Available
Chinese - Not Available
CHB (Han Chinese) - Not Available
AFR - Not Available
Japanese - Not Available
JPT (Japanese) - Not Available
EUR - Not Available
AMR - Not Available
Submission count
NA
Allele Nomenclature
Chromosome Location
Chr.X: 77508510-77508510 on Build GRCh38
Allele Frequency
1000Genome
Applied Biosystems
®
HapMap
Global - Not Available
Caucasian - Not Available
CEPH (CEU) - Not Available
EAS - Not Available
African American - Not Available
YRI (Yoruba) - Not Available
SAS - Not Available
Chinese - Not Available
CHB (Han Chinese) - Not Available
AFR - Not Available
Japanese - Not Available
JPT (Japanese) - Not Available
EUR - Not Available
AMR - Not Available
Submission count
NA
Allele Nomenclature
Chromosome Location
Chr.X: 77508514-77508514 on Build GRCh38
Allele Frequency
1000Genome
Applied Biosystems
®
HapMap
Global - Not Available
Caucasian - Not Available
CEPH (CEU) - Not Available
EAS - Not Available
African American - Not Available
YRI (Yoruba) - Not Available
SAS - Not Available
Chinese - Not Available
CHB (Han Chinese) - Not Available
AFR - Not Available
Japanese - Not Available
JPT (Japanese) - Not Available
EUR - Not Available
AMR - Not Available
Back To Top
More Information
Set Membership:
Less than 200 bp
Panther Classification:
Molecular Function -
DNA-binding transcription factor
gene-specific transcriptional regulator
Gene Ontology Categories:
Function(s)
Process(es)
DNA repair
DNA methylation
DNA recombination
nucleosome assembly
DNA replication-independent nucleosome assembly
chromatin remodeling
transcription, DNA-templated
regulation of transcription, DNA-templated
spermatogenesis
positive regulation of nuclear cell cycle DNA replication
covalent chromatin modification
DNA damage response, signal transduction by p53 class mediator
forebrain development
replication fork processing
positive regulation of telomere maintenance
DNA duplex unwinding
post-embryonic forelimb morphogenesis
multicellular organism growth
positive regulation of transcription from RNA polymerase II promoter
Sertoli cell development
protein localization to chromosome, telomeric region
seminiferous tubule development
cellular response to hydroxyurea
regulation of histone H3-K9 trimethylation
negative regulation of telomeric RNA transcription from RNA pol II promoter
positive regulation of telomeric RNA transcription from RNA pol II promoter
negative regulation of maintenance of mitotic sister chromatid cohesion, telomeric
DNA binding
DNA helicase activity
chromatin binding
helicase activity
protein binding
ATP binding
DNA translocase activity
methylated histone binding
histone binding
metal ion binding
chromo shadow domain binding
Format:
Each primer will be delivered in a single tube, dried-down
Quick Reference Guide
Primer Designer
™
Tool Quick Reference
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