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          • Home
          • › Search Tool
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          • › Mm01165689_m1
          See other UBR5 GE Assays ›
          Gene Symbol:
          Ubr5
          Gene Name:
          ubiquitin protein ligase E3 component n-recognin 5
          Gene Aliases:
          Edd, Edd1
          Chromosome Location:
          Chr.15: 37967328 - 38078854 on Build GRCm38
          Species:
          Mouse
          Species Specific ID (Flybase ID):
          -
          Assay ID Mm01165689_m1
          Best Coverage
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          Availability Inventoried
          Catalog # 4331182
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Ubr5
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_001081359.3 NP_001074828.2 50 - 51 7659 57
          NM_001112721.2 NP_001106192.1 50 - 51 7641 57
          GenBank mRNA AK122398.1 - 27 - 28 4132 57
          AY550908.1 - 50 - 51 7249 57
          BC047348.1 - 41 - 42 6152 57
          BC049162.1 - 21 - 22 3339 57
          BC057458.1 - 3 - 4 678 57
          BC057923.1 - 2 - 3 191 57

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          More Information


          Updated Mapping Information

          This assay targets the same location as MTA transcript cluster(s) TC1500001403.mm.1

          Set Membership:

          Amplicon length less than or equal to 70 Mammalian Gene Collection Recommended Assay Mus musculus 1700 Inventoried Probe spans exons

          Panther Classification:

          Molecular Function -

          ubiquitin-protein ligase protein modifying enzyme

          Gene Ontology Categories:

          Function(s) Process(es)

          protein polyubiquitination
          DNA repair
          cellular response to DNA damage stimulus
          positive regulation of protein import into nucleus, translocation
          positive regulation of catenin import into nucleus
          protein ubiquitination involved in ubiquitin-dependent protein catabolic process
          progesterone receptor signaling pathway
          positive regulation of canonical Wnt signaling pathway
          negative regulation of histone H2A K63-linked ubiquitination
          negative regulation of double-strand break repair
          RNA binding
          ubiquitin-protein transferase activity
          zinc ion binding
          UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
          ligase activity
          ribosomal S6-glutamic acid ligase activity
          ubiquitin-ubiquitin ligase activity
          ubiquitin binding
          coenzyme F420-0 gamma-glutamyl ligase activity
          coenzyme F420-2 alpha-glutamyl ligase activity
          metal ion binding
          protein-glycine ligase activity
          protein-glycine ligase activity, initiating
          protein-glycine ligase activity, elongating
          tubulin-glycine ligase activity
          protein-glutamic acid ligase activity
          tubulin-glutamic acid ligase activity

          MicroArray Probes:

          Affymetrix ABI

          Array Name Probe IDs Targets Target Type
          Affymetrix Mouse Clariom S Array PSR1500010864.mm.1 NM_001081359.3 Refseq
          Affymetrix Mouse Clariom S Array PSR1500010864.mm.1 NM_001112721.2 Refseq
          Affymetrix Mouse Clariom S Array PSR1500010864.mm.1 TC1500001403.mm.1 MTA TC
          Array Name Probe IDs Targets Target Type
          ABI Mouse Genome Survey Microarray 665056 - -

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