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          • Home
          • › Search Tool
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          • › Rn01427116_m1
          See other ATG4B GE Assays ›
          Gene Symbol:
          Atg4b
          Gene Name:
          autophagy related 4B, cysteine peptidase
          Gene Aliases:
          Apg4b
          Chromosome Location:
          Chr.9: 100888450 - 100920123 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn01427116_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price 284.00
          Your Price
          Online offer: 266.65
          266.65
          Check your price ›
          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Atg4b
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_001025711.1 NP_001020882.1 4 - 5 543 88
          XM_006245533.2 XP_006245595.1 10 - 11 1083 88
          XM_006245534.2 XP_006245596.1 9 - 10 986 88
          GenBank mRNA BC098833.1 - 4 - 5 543 7378703 88

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC0900001188.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length between 86 and 100 Mammalian Gene Collection Recommended Assay Rattus norvegicus Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Atg4b

          Panther Classification:

          Molecular Function -

          cysteine protease

          Gene Ontology Categories:

          Function(s) Process(es)

          autophagosome assembly
          mitophagy
          C-terminal protein lipidation
          proteolysis
          protein targeting to membrane
          autophagy
          cellular response to nitrogen starvation
          positive regulation of autophagy
          protein processing
          nucleophagy
          positive regulation of protein catabolic process
          protein delipidation
          molecular_function
          endopeptidase activity
          cysteine-type endopeptidase activity
          peptidase activity
          cysteine-type peptidase activity

          MicroArray Probes:

          Agilent Affymetrix Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P622512 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 936298 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 110579 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 3902 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 722069 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 909757 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 206860 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P622512 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P622512 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P622512 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P622512 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_42_P527887 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 104833 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10925659 - -
          Affymetrix Rat Gene 1.0 ST Array 10925653 - -
          Affymetrix Rat Gene 1.0 ST Array 10925654 - -
          Affymetrix Rat Gene 1.0 ST Array 10925655 - -
          Affymetrix Rat Gene 1.0 ST Array 10925656 - -
          Affymetrix Rat Gene 1.0 ST Array 10925652 - -
          Affymetrix Rat Gene 1.0 ST Array 10925657 - -
          Affymetrix Rat Gene 1.0 ST Array 10925658 - -
          Affymetrix Rat Gene 1.1 ST Array 10925646 - -
          Rat Genome 230 2.0 Array 1389273_PM_at - -
          Rat Genome 230 2.0 Array 1399042_at - -
          Rat Genome 230 2.0 Array 1389273_at - -
          Rat Genome 230 2.0 Array 1399042_PM_at - -
          Affymetrix HT Rat Focus Array 1389273_PM_at - -
          Affymetrix HT Rat Focus Array 1399042_at - -
          Affymetrix HT Rat Focus Array 1389273_at - -
          Affymetrix HT Rat Focus Array 1399042_PM_at - -
          Affymetrix Rat Clariom S Assay PSR0900010347.rn.1 TC0900001188.rn.1 RTA TC
          Rat Expression Set 230 1389273_at - -
          Rat Expression Set 230 1399042_PM_at - -
          Rat Expression Set 230 1399042_at - -
          Rat Expression Set 230 1389273_PM_at - -
          Affymetrix Rat Gene 1.0 ST Array 10925646 - -
          Rat Genome U34 Set rc_AA957311_at - -
          Rat Genome U34 Set rc_AI228455_at - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1357507 - -

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