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          • Home
          • › Search Tool
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          • › C_167778602_10
          See other APOBEC3C GT Assays ›
          SNP ID:
          rs149466884
          Gene
          APOBEC3C APOBEC3D APOBEC3F
          Gene Name
          apolipoprotein B mRNA editing enzyme catalytic subunit 3C
          apolipoprotein B mRNA editing enzyme catalytic subunit 3D
          apolipoprotein B mRNA editing enzyme catalytic subunit 3F
          Set Membership:
          -
          Chromosome Location:
          Chr.22: 39025117 - 39025117 on Build GRCh38
          Polymorphism:
          C/G, Transversion substitution
          Context Sequence [VIC/FAM]:

          ACGCAGAAATGTGCTTCTTATCTTG[C/G]TTCTGTGGCAACCGACTGCCTGCTA

          Assay ID C_167778602_10
          Size
          Availability Made To Order
          Catalog # 4351379
          Price
          Your Price
          Online offer:
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details



          Species:

          Human

          dbSNP Submissions:

          NA

          Phenotype:

          MIM: 607750 MIM: 609900 MIM: 608993

          Literature Links:

          APOBEC3C PubMed Links

          Allele Nomenclature:

          Minor Allele Frequency:

          1000Genome Applied Biosystems® HapMap
          Global
          C (0.00)
          (1.00)
          Caucasian - Not Available CEPH (CEU) - Not Available
          EAS
          C (0.00)
          (1.00)
          African American - Not Available YRI (Yoruba) - Not Available
          SAS
          C (0.00)
          (1.00)
          Chinese - Not Available CHB (Han Chinese) - Not Available
          AFR
          C (0.00)
          (1.00)
          Japanese - Not Available JPT (Japanese) - Not Available
          EUR
          C (0.00)
          (1.00)
          AMR
          C (0.00)
          (1.00)
          APOBEC3C - apolipoprotein B mRNA editing enzyme catalytic subunit 3C
          There are no transcripts associated with this gene.
          APOBEC3D - apolipoprotein B mRNA editing enzyme catalytic subunit 3D
          Transcript Accession SNP Location SNP Type Observed Codons Observed Amino Acid Protein ID
          NM_152426.3 Intron NP_689639.2
          XM_005261337.3 Intron XP_005261394.1
          XM_017028596.1 Intron XP_016884085.1
          APOBEC3F - apolipoprotein B mRNA editing enzyme catalytic subunit 3F
          Transcript Accession SNP Location SNP Type Observed Codons Observed Amino Acid Protein ID
          NM_001006666.1 Intron NP_001006667.1
          NM_145298.5 Intron NP_660341.2
          XM_011529994.2 Intron XP_011528296.1
          XM_017028642.1 Intron XP_016884131.1
          XM_017028643.1 Intron XP_016884132.1

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          More Information


          Panther Classification:

          Molecular Function -

          RNA processing factor

          Gene Ontology Categories:

          Function(s) Process(es)

          negative regulation of transposition
          innate immune response
          negative regulation of single stranded viral RNA replication via double stranded DNA intermediate
          defense response to virus
          DNA cytosine deamination
          positive regulation of defense response to virus by host
          cytidine deamination
          base conversion or substitution editing
          negative regulation of viral genome replication
          negative regulation of viral process
          DNA demethylation
          zinc ion binding
          hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
          RNA binding
          cytidine deaminase activity
          protein binding
          poly(A) RNA binding

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