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See other CLOCK GT Assays ›
SNP ID:
rs1801260
Gene
CLOCK TMEM165
Gene Name
Set Membership:
> HapMap
Chromosome Location:
Chr.4: 55435202 - 55435202 on Build GRCh38
Polymorphism:
A/G, Transition substitution
Context Sequence [VIC/FAM]:

ACCTAAAACACTGTCAGAACTGGCT[A/G]TGCCCCTATGATCACCTCCTGCTGG

Assay ID C___8746719_20
Size
Availability Made To Order
Catalog # 4351379
Price
Your Price
Online offer:
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Assay Details



Species:

 Human

dbSNP Submissions:

 NA

Phenotype:

 MIM: 601851 MIM: 614726

Literature Links:

 CLOCK PubMed Links

Allele Nomenclature:

Minor Allele Frequency:
1000Genome Applied Biosystems® HapMap
Global
C (0.23)
(0.77)
Caucasian - Not Available CEPH (CEU)
C (0.26)
(0.74)
EAS
C (0.10)
(0.90)
African American - Not Available YRI (Yoruba)
C (0.16)
(0.84)
SAS
C (0.38)
(0.62)
Chinese - Not Available JPT (Japanese)
C (0.21)
(0.79)
AFR
C (0.15)
(0.85)
Japanese - Not Available CHB (Han Chinese)
C (0.11)
(0.89)
EUR
C (0.31)
(0.69)
AMR
C (0.24)
(0.76)
CLOCK - clock circadian regulator
Transcript Accession SNP Location SNP Type Observed Codons Observed Amino Acid Protein ID
NM_001267843.1 2766 UTR 3 NP_001254772.1
NM_004898.3 2766 UTR 3 NP_004889.1
XM_005265787.2 2766 UTR 3 XP_005265844.1
XM_011534409.2 2766 UTR 3 XP_011532711.1
XM_011534410.2 2766 UTR 3 XP_011532712.1
XM_011534411.2 2766 UTR 3 XP_011532713.1
XM_017008854.1 2766 UTR 3 XP_016864343.1
XM_017008855.1 2766 UTR 3 XP_016864344.1
TMEM165 - transmembrane protein 165
Transcript Accession SNP Location SNP Type Observed Codons Observed Amino Acid Protein ID
NM_018475.4 2766 Intron NP_060945.2
XM_011534394.2 2766 Intron XP_011532696.1
XM_017008412.1 2766 Intron XP_016863901.1

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More Information


Set Membership:

 HapMap

Gene Ontology Categories:

Function(s) Process(es)


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