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- Gene Symbol
- C1QTNF1
- Assay Reference Genome
Location
Chr.17:79036993 on build GRCh38- Cytoband
- 17q25.3
Genomic Map
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Target Gene Details
Entrez Gene ID: | 114897 |
Gene Name: | C1q and TNF related 1 |
Gene Aliases: |
CTRP1, GIP, ZSIG37 |
Location: |
Chr.17:79022934-79049788 on Build GRCh38 |
Assay Gene Location: | Within Intron 5 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| C1QTNF1 | NM_030968.5 | NP_112230.1 | ||
| NM_153372.3 | NP_699203.1 | |||
| NM_198593.4 | NP_940995.1 | |||
| NM_198594.4 | NP_940996.1 | |||
| NR_049769.3 | ||||
| XM_006721664.2 | XP_006721727.1 | |||
| XM_006721666.2 | XP_006721729.1 | |||
| XM_024450561.2 | XP_024306329.1 | |||
| XM_047435295.1 | XP_047291251.1 | |||
| XM_047435296.1 | XP_047291252.1 | |||
| XM_047435297.1 | XP_047291253.1 | |||
| AF329840.1 | AAK17964.1 | |||
| AK055541.1 | BAB70947.1 | |||
| AK172767.1 | BAD18750.1 | |||
| AK292034.1 | BAF84723.1 | |||
| AY358424.2 | AAQ88790.1 | |||
| BC021553.1 | AAH21553.1 | |||
| DA875119.1 | ||||
| DA877694.1 | ||||
| DA910618.1 | ||||
| DA938689.1 | ||||
| DB126803.1 | ||||
| HY047084.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2025-12-01, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv4262229 | Chr.17:78653301 - 79063827 on Build GRCh38 | Duplication |
 TIMP2
CANT1
CYTH1
USP36
LGALS3BP
C1QTNF1
CEP295NL
C1QTNF1-AS1
|
| nsv521186 | Chr.17:79037010 - 79049340 on Build GRCh38 | Loss |
C1QTNF1
|
| nsv470610 | Chr.17:78973800 - 79091723 on Build GRCh38 | Loss |
RBFOX3
CANT1
LGALS3BP
C1QTNF1
C1QTNF1-AS1
ENGASE
|
| nsv5533745 | Chr.17:79031732 - 79038242 on Build GRCh38 | Deletion |
C1QTNF1
|
| nsv6529265 | Chr.17:78919705 - 79477438 on Build GRCh38 | Duplication |
TIMP2
RBFOX3
CANT1
LGALS3BP
C1QTNF1
C1QTNF1-AS1
ENGASE
|
| esv3641342 | Chr.17:79031520 - 79038284 on Build GRCh38 | Loss |
C1QTNF1
|
| nsv523650 | Chr.17:78933797 - 79165563 on Build GRCh38 | Loss |
RBFOX3
CANT1
LGALS3BP
C1QTNF1
C1QTNF1-AS1
ENGASE
|
| nsv1057193 | Chr.17:78921031 - 79481744 on Build GRCh38 | Gain |
TIMP2
RBFOX3
CANT1
LGALS3BP
C1QTNF1
C1QTNF1-AS1
ENGASE
|
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Additional Information:
For this assay, SNP(s) [rs76309435] are located under a primer sequence, SNP(s) [rs115448603] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
Copy Number
|
Gene Ontology Categories:
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